Gene : Cagra.1968s0062 C. grandiflora v1.1
Defline:  (1 of 2) PF06592 - Protein of unknown function (DUF1138) (DUF1138) Genomic Order:  62
Name:  ? Cagra.1968s0062 Secondary Identifier:  ? PAC:28910016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0062 0.5kb upstream 0.5kb upstream 2492 true Scaffold1968: 204907-207398 Capsella grandiflora
Cagra.1968s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 206899-207398 Capsella grandiflora
Cagra.1968s0062 0.5kb downstream 0.5kb downstream 2492 true Scaffold1968: 204407-206898 Capsella grandiflora
Cagra.1968s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 204407-204906 Capsella grandiflora
Cagra.1968s0062 1.0kb upstream 1.0kb upstream 2992 true Scaffold1968: 204907-207898 Capsella grandiflora
Cagra.1968s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 206899-207898 Capsella grandiflora
Cagra.1968s0062 1.0kb downstream 1.0kb downstream 2992 true Scaffold1968: 203907-206898 Capsella grandiflora
Cagra.1968s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 203907-204906 Capsella grandiflora
Cagra.1968s0062 2.0kb upstream 2.0kb upstream 3992 true Scaffold1968: 204907-208898 Capsella grandiflora
Cagra.1968s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 206899-208898 Capsella grandiflora
Cagra.1968s0062 2.0kb downstream 2.0kb downstream 3992 true Scaffold1968: 202907-206898 Capsella grandiflora
Cagra.1968s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 202907-204906 Capsella grandiflora
Cagra.1968s0062 5.0kb upstream 5.0kb upstream 6992 true Scaffold1968: 204907-211898 Capsella grandiflora
Cagra.1968s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 206899-211898 Capsella grandiflora
Cagra.1968s0062 5.0kb downstream 5.0kb downstream 6992 true Scaffold1968: 199907-206898 Capsella grandiflora
Cagra.1968s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 199907-204906 Capsella grandiflora
Cagra.1968s0062 10.0kb upstream 10.0kb upstream 11992 true Scaffold1968: 204907-216898 Capsella grandiflora
Cagra.1968s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 206899-216898 Capsella grandiflora
Cagra.1968s0062 10.0kb downstream 10.0kb downstream 11992 true Scaffold1968: 194907-206898 Capsella grandiflora
Cagra.1968s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 194907-204906 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380485 5261 Brassicaceae View MSA
123834479 5264 Brassicales-Malvales View MSA
124337878 5266 SBM View MSA
124246581 5268 Malvidae View MSA
124073566 5270 Rosid View MSA
123737481 5271 Pentapetalae View MSA
122795040 5272 Eudicot View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain