Gene : Cagra.1968s0088 C. grandiflora v1.1
Defline:  (1 of 46) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  88
Name:  ? Cagra.1968s0088 Secondary Identifier:  ? PAC:28910077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0088 0.5kb upstream 0.5kb upstream 1563 true Scaffold1968: 294058-295620 Capsella grandiflora
Cagra.1968s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 295121-295620 Capsella grandiflora
Cagra.1968s0088 0.5kb downstream 0.5kb downstream 1563 true Scaffold1968: 293558-295120 Capsella grandiflora
Cagra.1968s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 293558-294057 Capsella grandiflora
Cagra.1968s0088 1.0kb upstream 1.0kb upstream 2063 true Scaffold1968: 294058-296120 Capsella grandiflora
Cagra.1968s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 295121-296120 Capsella grandiflora
Cagra.1968s0088 1.0kb downstream 1.0kb downstream 2063 true Scaffold1968: 293058-295120 Capsella grandiflora
Cagra.1968s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 293058-294057 Capsella grandiflora
Cagra.1968s0088 2.0kb upstream 2.0kb upstream 3063 true Scaffold1968: 294058-297120 Capsella grandiflora
Cagra.1968s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 295121-297120 Capsella grandiflora
Cagra.1968s0088 2.0kb downstream 2.0kb downstream 3063 true Scaffold1968: 292058-295120 Capsella grandiflora
Cagra.1968s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 292058-294057 Capsella grandiflora
Cagra.1968s0088 5.0kb upstream 5.0kb upstream 6063 true Scaffold1968: 294058-300120 Capsella grandiflora
Cagra.1968s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 295121-300120 Capsella grandiflora
Cagra.1968s0088 5.0kb downstream 5.0kb downstream 6063 true Scaffold1968: 289058-295120 Capsella grandiflora
Cagra.1968s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 289058-294057 Capsella grandiflora
Cagra.1968s0088 10.0kb upstream 10.0kb upstream 11063 true Scaffold1968: 294058-305120 Capsella grandiflora
Cagra.1968s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 295121-305120 Capsella grandiflora
Cagra.1968s0088 10.0kb downstream 10.0kb downstream 11063 true Scaffold1968: 284058-295120 Capsella grandiflora
Cagra.1968s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 284058-294057 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378069 5261 Brassicaceae View MSA
123836622 5264 Brassicales-Malvales View MSA
124346787 5266 SBM View MSA
124253995 5268 Malvidae View MSA
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain