Gene : Cagra.1968s0089 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11751:SF380 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED Genomic Order:  89
Name:  ? Cagra.1968s0089 Secondary Identifier:  ? PAC:28910062
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ETHYL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7270 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0089 0.5kb upstream 0.5kb upstream 2837 true Scaffold1968: 297542-300378 Capsella grandiflora
Cagra.1968s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 297542-298041 Capsella grandiflora
Cagra.1968s0089 0.5kb downstream 0.5kb downstream 2837 true Scaffold1968: 298042-300878 Capsella grandiflora
Cagra.1968s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 300379-300878 Capsella grandiflora
Cagra.1968s0089 1.0kb upstream 1.0kb upstream 3337 true Scaffold1968: 297042-300378 Capsella grandiflora
Cagra.1968s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 297042-298041 Capsella grandiflora
Cagra.1968s0089 1.0kb downstream 1.0kb downstream 3337 true Scaffold1968: 298042-301378 Capsella grandiflora
Cagra.1968s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 300379-301378 Capsella grandiflora
Cagra.1968s0089 2.0kb upstream 2.0kb upstream 4337 true Scaffold1968: 296042-300378 Capsella grandiflora
Cagra.1968s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 296042-298041 Capsella grandiflora
Cagra.1968s0089 2.0kb downstream 2.0kb downstream 4337 true Scaffold1968: 298042-302378 Capsella grandiflora
Cagra.1968s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 300379-302378 Capsella grandiflora
Cagra.1968s0089 5.0kb upstream 5.0kb upstream 7337 true Scaffold1968: 293042-300378 Capsella grandiflora
Cagra.1968s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 293042-298041 Capsella grandiflora
Cagra.1968s0089 5.0kb downstream 5.0kb downstream 7337 true Scaffold1968: 298042-305378 Capsella grandiflora
Cagra.1968s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 300379-305378 Capsella grandiflora
Cagra.1968s0089 10.0kb upstream 10.0kb upstream 12337 true Scaffold1968: 288042-300378 Capsella grandiflora
Cagra.1968s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 288042-298041 Capsella grandiflora
Cagra.1968s0089 10.0kb downstream 10.0kb downstream 12337 true Scaffold1968: 298042-310378 Capsella grandiflora
Cagra.1968s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 300379-310378 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368056 5261 Brassicaceae View MSA
123841414 5264 Brassicales-Malvales View MSA
124344234 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain