Gene : Cagra.1968s0136 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11679//PTHR11679:SF38 - VESICLE PROTEIN SORTING-ASSOCIATED Genomic Order:  136
Name:  ? Cagra.1968s0136 Secondary Identifier:  ? PAC:28910147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0136 0.5kb upstream 0.5kb upstream 5038 true Scaffold1968: 462610-467647 Capsella grandiflora
Cagra.1968s0136 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 462610-463109 Capsella grandiflora
Cagra.1968s0136 0.5kb downstream 0.5kb downstream 5038 true Scaffold1968: 463110-468147 Capsella grandiflora
Cagra.1968s0136 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 467648-468147 Capsella grandiflora
Cagra.1968s0136 1.0kb upstream 1.0kb upstream 5538 true Scaffold1968: 462110-467647 Capsella grandiflora
Cagra.1968s0136 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 462110-463109 Capsella grandiflora
Cagra.1968s0136 1.0kb downstream 1.0kb downstream 5538 true Scaffold1968: 463110-468647 Capsella grandiflora
Cagra.1968s0136 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 467648-468647 Capsella grandiflora
Cagra.1968s0136 2.0kb upstream 2.0kb upstream 6538 true Scaffold1968: 461110-467647 Capsella grandiflora
Cagra.1968s0136 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 461110-463109 Capsella grandiflora
Cagra.1968s0136 2.0kb downstream 2.0kb downstream 6538 true Scaffold1968: 463110-469647 Capsella grandiflora
Cagra.1968s0136 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 467648-469647 Capsella grandiflora
Cagra.1968s0136 5.0kb upstream 5.0kb upstream 9538 true Scaffold1968: 458110-467647 Capsella grandiflora
Cagra.1968s0136 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 458110-463109 Capsella grandiflora
Cagra.1968s0136 5.0kb downstream 5.0kb downstream 9538 true Scaffold1968: 463110-472647 Capsella grandiflora
Cagra.1968s0136 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 467648-472647 Capsella grandiflora
Cagra.1968s0136 10.0kb upstream 10.0kb upstream 14538 true Scaffold1968: 453110-467647 Capsella grandiflora
Cagra.1968s0136 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 453110-463109 Capsella grandiflora
Cagra.1968s0136 10.0kb downstream 10.0kb downstream 14538 true Scaffold1968: 463110-477647 Capsella grandiflora
Cagra.1968s0136 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 467648-477647 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373959 5261 Brassicaceae View MSA
123832059 5264 Brassicales-Malvales View MSA
124344775 5266 SBM View MSA
124244400 5268 Malvidae View MSA
124071068 5270 Rosid View MSA
123752933 5271 Pentapetalae View MSA
122792100 5272 Eudicot View MSA
122047096 5273 Angiosperm View MSA
121350435 5274 Embryophyte View MSA
123426000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain