Gene : Cagra.1961s0067 C. grandiflora v1.1
Defline:  (1 of 1) KOG2356 - Transcriptional activator, adenine-specific DNA methyltransferase Genomic Order:  67
Name:  ? Cagra.1961s0067 Secondary Identifier:  ? PAC:28911567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0067 0.5kb upstream 0.5kb upstream 3053 true Scaffold1961: 257186-260238 Capsella grandiflora
Cagra.1961s0067 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 259739-260238 Capsella grandiflora
Cagra.1961s0067 0.5kb downstream 0.5kb downstream 3053 true Scaffold1961: 256686-259738 Capsella grandiflora
Cagra.1961s0067 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 256686-257185 Capsella grandiflora
Cagra.1961s0067 1.0kb upstream 1.0kb upstream 3553 true Scaffold1961: 257186-260738 Capsella grandiflora
Cagra.1961s0067 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 259739-260738 Capsella grandiflora
Cagra.1961s0067 1.0kb downstream 1.0kb downstream 3553 true Scaffold1961: 256186-259738 Capsella grandiflora
Cagra.1961s0067 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 256186-257185 Capsella grandiflora
Cagra.1961s0067 2.0kb upstream 2.0kb upstream 4553 true Scaffold1961: 257186-261738 Capsella grandiflora
Cagra.1961s0067 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 259739-261738 Capsella grandiflora
Cagra.1961s0067 2.0kb downstream 2.0kb downstream 4553 true Scaffold1961: 255186-259738 Capsella grandiflora
Cagra.1961s0067 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 255186-257185 Capsella grandiflora
Cagra.1961s0067 5.0kb upstream 5.0kb upstream 7553 true Scaffold1961: 257186-264738 Capsella grandiflora
Cagra.1961s0067 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 259739-264738 Capsella grandiflora
Cagra.1961s0067 5.0kb downstream 5.0kb downstream 7553 true Scaffold1961: 252186-259738 Capsella grandiflora
Cagra.1961s0067 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 252186-257185 Capsella grandiflora
Cagra.1961s0067 10.0kb upstream 10.0kb upstream 12553 true Scaffold1961: 257186-269738 Capsella grandiflora
Cagra.1961s0067 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 259739-269738 Capsella grandiflora
Cagra.1961s0067 10.0kb downstream 10.0kb downstream 12553 true Scaffold1961: 247186-259738 Capsella grandiflora
Cagra.1961s0067 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 247186-257185 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041346 5273 Angiosperm View MSA
122363277 5261 Brassicaceae View MSA
123828771 5264 Brassicales-Malvales View MSA
124339279 5266 SBM View MSA
124241589 5268 Malvidae View MSA
124068537 5270 Rosid View MSA
123738217 5271 Pentapetalae View MSA
122788496 5272 Eudicot View MSA
121344904 5274 Embryophyte View MSA
123380126 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain