Gene : Cagra.1961s0077 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11972:SF44 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E Genomic Order:  77
Name:  ? Cagra.1961s0077 Secondary Identifier:  ? PAC:28911502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0077 0.5kb upstream 0.5kb upstream 5227 true Scaffold1961: 298632-303858 Capsella grandiflora
Cagra.1961s0077 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 303359-303858 Capsella grandiflora
Cagra.1961s0077 0.5kb downstream 0.5kb downstream 5227 true Scaffold1961: 298132-303358 Capsella grandiflora
Cagra.1961s0077 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 298132-298631 Capsella grandiflora
Cagra.1961s0077 1.0kb upstream 1.0kb upstream 5727 true Scaffold1961: 298632-304358 Capsella grandiflora
Cagra.1961s0077 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 303359-304358 Capsella grandiflora
Cagra.1961s0077 1.0kb downstream 1.0kb downstream 5727 true Scaffold1961: 297632-303358 Capsella grandiflora
Cagra.1961s0077 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 297632-298631 Capsella grandiflora
Cagra.1961s0077 2.0kb upstream 2.0kb upstream 6727 true Scaffold1961: 298632-305358 Capsella grandiflora
Cagra.1961s0077 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 303359-305358 Capsella grandiflora
Cagra.1961s0077 2.0kb downstream 2.0kb downstream 6727 true Scaffold1961: 296632-303358 Capsella grandiflora
Cagra.1961s0077 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 296632-298631 Capsella grandiflora
Cagra.1961s0077 5.0kb upstream 5.0kb upstream 9727 true Scaffold1961: 298632-308358 Capsella grandiflora
Cagra.1961s0077 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 303359-308358 Capsella grandiflora
Cagra.1961s0077 5.0kb downstream 5.0kb downstream 9727 true Scaffold1961: 293632-303358 Capsella grandiflora
Cagra.1961s0077 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 293632-298631 Capsella grandiflora
Cagra.1961s0077 10.0kb upstream 10.0kb upstream 14727 true Scaffold1961: 298632-313358 Capsella grandiflora
Cagra.1961s0077 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 303359-313358 Capsella grandiflora
Cagra.1961s0077 10.0kb downstream 10.0kb downstream 14727 true Scaffold1961: 288632-303358 Capsella grandiflora
Cagra.1961s0077 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 288632-298631 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375696 5261 Brassicaceae View MSA
123831451 5264 Brassicales-Malvales View MSA
124339471 5266 SBM View MSA
124242422 5268 Malvidae View MSA
124066412 5270 Rosid View MSA
123737833 5271 Pentapetalae View MSA
122791014 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain