Gene : Cagra.1961s0084 C. grandiflora v1.1
Defline:  (1 of 1) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Genomic Order:  84
Name:  ? Cagra.1961s0084 Secondary Identifier:  ? PAC:28911538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0084 0.5kb upstream 0.5kb upstream 1896 true Scaffold1961: 339218-341113 Capsella grandiflora
Cagra.1961s0084 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 339218-339717 Capsella grandiflora
Cagra.1961s0084 0.5kb downstream 0.5kb downstream 1896 true Scaffold1961: 339718-341613 Capsella grandiflora
Cagra.1961s0084 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 341114-341613 Capsella grandiflora
Cagra.1961s0084 1.0kb upstream 1.0kb upstream 2396 true Scaffold1961: 338718-341113 Capsella grandiflora
Cagra.1961s0084 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 338718-339717 Capsella grandiflora
Cagra.1961s0084 1.0kb downstream 1.0kb downstream 2396 true Scaffold1961: 339718-342113 Capsella grandiflora
Cagra.1961s0084 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 341114-342113 Capsella grandiflora
Cagra.1961s0084 2.0kb upstream 2.0kb upstream 3396 true Scaffold1961: 337718-341113 Capsella grandiflora
Cagra.1961s0084 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 337718-339717 Capsella grandiflora
Cagra.1961s0084 2.0kb downstream 2.0kb downstream 3396 true Scaffold1961: 339718-343113 Capsella grandiflora
Cagra.1961s0084 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 341114-343113 Capsella grandiflora
Cagra.1961s0084 5.0kb upstream 5.0kb upstream 6396 true Scaffold1961: 334718-341113 Capsella grandiflora
Cagra.1961s0084 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 334718-339717 Capsella grandiflora
Cagra.1961s0084 5.0kb downstream 5.0kb downstream 6396 true Scaffold1961: 339718-346113 Capsella grandiflora
Cagra.1961s0084 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 341114-346113 Capsella grandiflora
Cagra.1961s0084 10.0kb upstream 10.0kb upstream 11396 true Scaffold1961: 329718-341113 Capsella grandiflora
Cagra.1961s0084 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 329718-339717 Capsella grandiflora
Cagra.1961s0084 10.0kb downstream 10.0kb downstream 11396 true Scaffold1961: 339718-351113 Capsella grandiflora
Cagra.1961s0084 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 341114-351113 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366294 5261 Brassicaceae View MSA
123830294 5264 Brassicales-Malvales View MSA
124337843 5266 SBM View MSA
124241366 5268 Malvidae View MSA
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain