Gene : Cagra.1961s0104 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  104
Name:  ? Cagra.1961s0104 Secondary Identifier:  ? PAC:28911551
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0104 0.5kb upstream 0.5kb upstream 4185 true Scaffold1961: 399305-403489 Capsella grandiflora
Cagra.1961s0104 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 402990-403489 Capsella grandiflora
Cagra.1961s0104 0.5kb downstream 0.5kb downstream 4185 true Scaffold1961: 398805-402989 Capsella grandiflora
Cagra.1961s0104 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 398805-399304 Capsella grandiflora
Cagra.1961s0104 1.0kb upstream 1.0kb upstream 4685 true Scaffold1961: 399305-403989 Capsella grandiflora
Cagra.1961s0104 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 402990-403989 Capsella grandiflora
Cagra.1961s0104 1.0kb downstream 1.0kb downstream 4685 true Scaffold1961: 398305-402989 Capsella grandiflora
Cagra.1961s0104 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 398305-399304 Capsella grandiflora
Cagra.1961s0104 2.0kb upstream 2.0kb upstream 5685 true Scaffold1961: 399305-404989 Capsella grandiflora
Cagra.1961s0104 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 402990-404989 Capsella grandiflora
Cagra.1961s0104 2.0kb downstream 2.0kb downstream 5685 true Scaffold1961: 397305-402989 Capsella grandiflora
Cagra.1961s0104 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 397305-399304 Capsella grandiflora
Cagra.1961s0104 5.0kb upstream 5.0kb upstream 6488 true Scaffold1961: 399305-405792 Capsella grandiflora
Cagra.1961s0104 5.0kb upstream 5.0kb upstream 2803 false Scaffold1961: 402990-405792 Capsella grandiflora
Cagra.1961s0104 5.0kb downstream 5.0kb downstream 8685 true Scaffold1961: 394305-402989 Capsella grandiflora
Cagra.1961s0104 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 394305-399304 Capsella grandiflora
Cagra.1961s0104 10.0kb upstream 10.0kb upstream 6488 true Scaffold1961: 399305-405792 Capsella grandiflora
Cagra.1961s0104 10.0kb upstream 10.0kb upstream 2803 false Scaffold1961: 402990-405792 Capsella grandiflora
Cagra.1961s0104 10.0kb downstream 10.0kb downstream 13685 true Scaffold1961: 389305-402989 Capsella grandiflora
Cagra.1961s0104 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 389305-399304 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375002 5261 Brassicaceae View MSA
123800861 5264 Brassicales-Malvales View MSA
124350713 5266 SBM View MSA
124239510 5268 Malvidae View MSA
124066157 5270 Rosid View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain