Gene : Cagra.1966s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22891:SF40 - PROTEIN ARGONAUTE 5 Genomic Order:  1
Name:  ? Cagra.1966s0001 Secondary Identifier:  ? PAC:28903019
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1966s0001 0.5kb upstream 0.5kb upstream 5277 true Scaffold1966: 1-5277 Capsella grandiflora
Cagra.1966s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold1966: 1-2 Capsella grandiflora
Cagra.1966s0001 0.5kb downstream 0.5kb downstream 5775 true Scaffold1966: 3-5777 Capsella grandiflora
Cagra.1966s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1966: 5278-5777 Capsella grandiflora
Cagra.1966s0001 1.0kb upstream 1.0kb upstream 5277 true Scaffold1966: 1-5277 Capsella grandiflora
Cagra.1966s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold1966: 1-2 Capsella grandiflora
Cagra.1966s0001 1.0kb downstream 1.0kb downstream 6275 true Scaffold1966: 3-6277 Capsella grandiflora
Cagra.1966s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1966: 5278-6277 Capsella grandiflora
Cagra.1966s0001 2.0kb upstream 2.0kb upstream 5277 true Scaffold1966: 1-5277 Capsella grandiflora
Cagra.1966s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold1966: 1-2 Capsella grandiflora
Cagra.1966s0001 2.0kb downstream 2.0kb downstream 7275 true Scaffold1966: 3-7277 Capsella grandiflora
Cagra.1966s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1966: 5278-7277 Capsella grandiflora
Cagra.1966s0001 5.0kb upstream 5.0kb upstream 5277 true Scaffold1966: 1-5277 Capsella grandiflora
Cagra.1966s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold1966: 1-2 Capsella grandiflora
Cagra.1966s0001 5.0kb downstream 5.0kb downstream 10275 true Scaffold1966: 3-10277 Capsella grandiflora
Cagra.1966s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1966: 5278-10277 Capsella grandiflora
Cagra.1966s0001 10.0kb upstream 10.0kb upstream 5277 true Scaffold1966: 1-5277 Capsella grandiflora
Cagra.1966s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold1966: 1-2 Capsella grandiflora
Cagra.1966s0001 10.0kb downstream 10.0kb downstream 15275 true Scaffold1966: 3-15277 Capsella grandiflora
Cagra.1966s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1966: 5278-15277 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
122374666 5261 Brassicaceae View MSA
123829535 5264 Brassicales-Malvales View MSA
124340792 5266 SBM View MSA
124241334 5268 Malvidae View MSA
124068081 5270 Rosid View MSA
123740580 5271 Pentapetalae View MSA
122786970 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain