Gene : Cagra.1968s0013 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33824:SF3 - POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  13
Name:  ? Cagra.1968s0013 Secondary Identifier:  ? PAC:28910075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0013 0.5kb upstream 0.5kb upstream 2159 true Scaffold1968: 37082-39240 Capsella grandiflora
Cagra.1968s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 37082-37581 Capsella grandiflora
Cagra.1968s0013 0.5kb downstream 0.5kb downstream 2159 true Scaffold1968: 37582-39740 Capsella grandiflora
Cagra.1968s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 39241-39740 Capsella grandiflora
Cagra.1968s0013 1.0kb upstream 1.0kb upstream 2659 true Scaffold1968: 36582-39240 Capsella grandiflora
Cagra.1968s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 36582-37581 Capsella grandiflora
Cagra.1968s0013 1.0kb downstream 1.0kb downstream 2659 true Scaffold1968: 37582-40240 Capsella grandiflora
Cagra.1968s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 39241-40240 Capsella grandiflora
Cagra.1968s0013 2.0kb upstream 2.0kb upstream 3659 true Scaffold1968: 35582-39240 Capsella grandiflora
Cagra.1968s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 35582-37581 Capsella grandiflora
Cagra.1968s0013 2.0kb downstream 2.0kb downstream 3659 true Scaffold1968: 37582-41240 Capsella grandiflora
Cagra.1968s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 39241-41240 Capsella grandiflora
Cagra.1968s0013 5.0kb upstream 5.0kb upstream 6659 true Scaffold1968: 32582-39240 Capsella grandiflora
Cagra.1968s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 32582-37581 Capsella grandiflora
Cagra.1968s0013 5.0kb downstream 5.0kb downstream 6659 true Scaffold1968: 37582-44240 Capsella grandiflora
Cagra.1968s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 39241-44240 Capsella grandiflora
Cagra.1968s0013 10.0kb upstream 10.0kb upstream 11659 true Scaffold1968: 27582-39240 Capsella grandiflora
Cagra.1968s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 27582-37581 Capsella grandiflora
Cagra.1968s0013 10.0kb downstream 10.0kb downstream 11659 true Scaffold1968: 37582-49240 Capsella grandiflora
Cagra.1968s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 39241-49240 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366547 5261 Brassicaceae View MSA
123831729 5264 Brassicales-Malvales View MSA
124340151 5266 SBM View MSA
124239054 5268 Malvidae View MSA
124063250 5270 Rosid View MSA
123741209 5271 Pentapetalae View MSA
122787118 5272 Eudicot View MSA
122046905 5273 Angiosperm View MSA
121345017 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain