Gene : Cagra.1968s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Genomic Order:  19
Name:  ? Cagra.1968s0019 Secondary Identifier:  ? PAC:28910093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0019 0.5kb upstream 0.5kb upstream 2518 true Scaffold1968: 56436-58953 Capsella grandiflora
Cagra.1968s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 58454-58953 Capsella grandiflora
Cagra.1968s0019 0.5kb downstream 0.5kb downstream 2518 true Scaffold1968: 55936-58453 Capsella grandiflora
Cagra.1968s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 55936-56435 Capsella grandiflora
Cagra.1968s0019 1.0kb upstream 1.0kb upstream 3018 true Scaffold1968: 56436-59453 Capsella grandiflora
Cagra.1968s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 58454-59453 Capsella grandiflora
Cagra.1968s0019 1.0kb downstream 1.0kb downstream 3018 true Scaffold1968: 55436-58453 Capsella grandiflora
Cagra.1968s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 55436-56435 Capsella grandiflora
Cagra.1968s0019 2.0kb upstream 2.0kb upstream 4018 true Scaffold1968: 56436-60453 Capsella grandiflora
Cagra.1968s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 58454-60453 Capsella grandiflora
Cagra.1968s0019 2.0kb downstream 2.0kb downstream 4018 true Scaffold1968: 54436-58453 Capsella grandiflora
Cagra.1968s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 54436-56435 Capsella grandiflora
Cagra.1968s0019 5.0kb upstream 5.0kb upstream 7018 true Scaffold1968: 56436-63453 Capsella grandiflora
Cagra.1968s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 58454-63453 Capsella grandiflora
Cagra.1968s0019 5.0kb downstream 5.0kb downstream 7018 true Scaffold1968: 51436-58453 Capsella grandiflora
Cagra.1968s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 51436-56435 Capsella grandiflora
Cagra.1968s0019 10.0kb upstream 10.0kb upstream 12018 true Scaffold1968: 56436-68453 Capsella grandiflora
Cagra.1968s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 58454-68453 Capsella grandiflora
Cagra.1968s0019 10.0kb downstream 10.0kb downstream 12018 true Scaffold1968: 46436-58453 Capsella grandiflora
Cagra.1968s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 46436-56435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367441 5261 Brassicaceae View MSA
123829285 5264 Brassicales-Malvales View MSA
124344241 5266 SBM View MSA
124250722 5268 Malvidae View MSA
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain