Gene : Cagra.1957s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING Genomic Order:  3
Name:  ? Cagra.1957s0003 Secondary Identifier:  ? PAC:28916411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1957s0003 0.5kb upstream 0.5kb upstream 3300 true Scaffold1957: 5209-8508 Capsella grandiflora
Cagra.1957s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1957: 8009-8508 Capsella grandiflora
Cagra.1957s0003 0.5kb downstream 0.5kb downstream 3300 true Scaffold1957: 4709-8008 Capsella grandiflora
Cagra.1957s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1957: 4709-5208 Capsella grandiflora
Cagra.1957s0003 1.0kb upstream 1.0kb upstream 3800 true Scaffold1957: 5209-9008 Capsella grandiflora
Cagra.1957s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1957: 8009-9008 Capsella grandiflora
Cagra.1957s0003 1.0kb downstream 1.0kb downstream 3800 true Scaffold1957: 4209-8008 Capsella grandiflora
Cagra.1957s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1957: 4209-5208 Capsella grandiflora
Cagra.1957s0003 2.0kb upstream 2.0kb upstream 4800 true Scaffold1957: 5209-10008 Capsella grandiflora
Cagra.1957s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1957: 8009-10008 Capsella grandiflora
Cagra.1957s0003 2.0kb downstream 2.0kb downstream 4800 true Scaffold1957: 3209-8008 Capsella grandiflora
Cagra.1957s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1957: 3209-5208 Capsella grandiflora
Cagra.1957s0003 5.0kb upstream 5.0kb upstream 7800 true Scaffold1957: 5209-13008 Capsella grandiflora
Cagra.1957s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1957: 8009-13008 Capsella grandiflora
Cagra.1957s0003 5.0kb downstream 5.0kb downstream 7800 true Scaffold1957: 209-8008 Capsella grandiflora
Cagra.1957s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1957: 209-5208 Capsella grandiflora
Cagra.1957s0003 10.0kb upstream 10.0kb upstream 12800 true Scaffold1957: 5209-18008 Capsella grandiflora
Cagra.1957s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1957: 8009-18008 Capsella grandiflora
Cagra.1957s0003 10.0kb downstream 10.0kb downstream 8008 true Scaffold1957: 1-8008 Capsella grandiflora
Cagra.1957s0003 10.0kb downstream 10.0kb downstream 5208 false Scaffold1957: 1-5208 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364485 5261 Brassicaceae View MSA
123839935 5264 Brassicales-Malvales View MSA
124344629 5266 SBM View MSA
124251386 5268 Malvidae View MSA
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain