Gene : Cagra.1961s0024 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  24
Name:  ? Cagra.1961s0024 Secondary Identifier:  ? PAC:28911543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0024 0.5kb upstream 0.5kb upstream 5030 true Scaffold1961: 106636-111665 Capsella grandiflora
Cagra.1961s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 106636-107135 Capsella grandiflora
Cagra.1961s0024 0.5kb downstream 0.5kb downstream 5030 true Scaffold1961: 107136-112165 Capsella grandiflora
Cagra.1961s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 111666-112165 Capsella grandiflora
Cagra.1961s0024 1.0kb upstream 1.0kb upstream 5530 true Scaffold1961: 106136-111665 Capsella grandiflora
Cagra.1961s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 106136-107135 Capsella grandiflora
Cagra.1961s0024 1.0kb downstream 1.0kb downstream 5530 true Scaffold1961: 107136-112665 Capsella grandiflora
Cagra.1961s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 111666-112665 Capsella grandiflora
Cagra.1961s0024 2.0kb upstream 2.0kb upstream 6530 true Scaffold1961: 105136-111665 Capsella grandiflora
Cagra.1961s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 105136-107135 Capsella grandiflora
Cagra.1961s0024 2.0kb downstream 2.0kb downstream 6530 true Scaffold1961: 107136-113665 Capsella grandiflora
Cagra.1961s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 111666-113665 Capsella grandiflora
Cagra.1961s0024 5.0kb upstream 5.0kb upstream 9530 true Scaffold1961: 102136-111665 Capsella grandiflora
Cagra.1961s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 102136-107135 Capsella grandiflora
Cagra.1961s0024 5.0kb downstream 5.0kb downstream 9530 true Scaffold1961: 107136-116665 Capsella grandiflora
Cagra.1961s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 111666-116665 Capsella grandiflora
Cagra.1961s0024 10.0kb upstream 10.0kb upstream 14530 true Scaffold1961: 97136-111665 Capsella grandiflora
Cagra.1961s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 97136-107135 Capsella grandiflora
Cagra.1961s0024 10.0kb downstream 10.0kb downstream 14530 true Scaffold1961: 107136-121665 Capsella grandiflora
Cagra.1961s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 111666-121665 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374314 5261 Brassicaceae View MSA
123841089 5264 Brassicales-Malvales View MSA
124343688 5266 SBM View MSA
124252265 5268 Malvidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain