Gene : Cagra.1961s0016 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10263:SF13 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Genomic Order:  16
Name:  ? Cagra.1961s0016 Secondary Identifier:  ? PAC:28911556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0016 0.5kb upstream 0.5kb upstream 1895 true Scaffold1961: 52190-54084 Capsella grandiflora
Cagra.1961s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 53585-54084 Capsella grandiflora
Cagra.1961s0016 0.5kb downstream 0.5kb downstream 1895 true Scaffold1961: 51690-53584 Capsella grandiflora
Cagra.1961s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 51690-52189 Capsella grandiflora
Cagra.1961s0016 1.0kb upstream 1.0kb upstream 2395 true Scaffold1961: 52190-54584 Capsella grandiflora
Cagra.1961s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 53585-54584 Capsella grandiflora
Cagra.1961s0016 1.0kb downstream 1.0kb downstream 2395 true Scaffold1961: 51190-53584 Capsella grandiflora
Cagra.1961s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 51190-52189 Capsella grandiflora
Cagra.1961s0016 2.0kb upstream 2.0kb upstream 3395 true Scaffold1961: 52190-55584 Capsella grandiflora
Cagra.1961s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 53585-55584 Capsella grandiflora
Cagra.1961s0016 2.0kb downstream 2.0kb downstream 3395 true Scaffold1961: 50190-53584 Capsella grandiflora
Cagra.1961s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 50190-52189 Capsella grandiflora
Cagra.1961s0016 5.0kb upstream 5.0kb upstream 6395 true Scaffold1961: 52190-58584 Capsella grandiflora
Cagra.1961s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 53585-58584 Capsella grandiflora
Cagra.1961s0016 5.0kb downstream 5.0kb downstream 6395 true Scaffold1961: 47190-53584 Capsella grandiflora
Cagra.1961s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 47190-52189 Capsella grandiflora
Cagra.1961s0016 10.0kb upstream 10.0kb upstream 11395 true Scaffold1961: 52190-63584 Capsella grandiflora
Cagra.1961s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 53585-63584 Capsella grandiflora
Cagra.1961s0016 10.0kb downstream 10.0kb downstream 11395 true Scaffold1961: 42190-53584 Capsella grandiflora
Cagra.1961s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 42190-52189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379842 5261 Brassicaceae View MSA
123840555 5264 Brassicales-Malvales View MSA
124343812 5266 SBM View MSA
124250754 5268 Malvidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain