Gene : Cagra.2257s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Genomic Order:  1
Name:  ? Cagra.2257s0001 Secondary Identifier:  ? PAC:28916833
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5837 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2257s0001 0.5kb upstream 0.5kb upstream 1380 true Scaffold2257: 4716-6095 Capsella grandiflora
Cagra.2257s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2257: 4716-5215 Capsella grandiflora
Cagra.2257s0001 0.5kb downstream 0.5kb downstream 1380 true Scaffold2257: 5216-6595 Capsella grandiflora
Cagra.2257s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2257: 6096-6595 Capsella grandiflora
Cagra.2257s0001 1.0kb upstream 1.0kb upstream 1880 true Scaffold2257: 4216-6095 Capsella grandiflora
Cagra.2257s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2257: 4216-5215 Capsella grandiflora
Cagra.2257s0001 1.0kb downstream 1.0kb downstream 1880 true Scaffold2257: 5216-7095 Capsella grandiflora
Cagra.2257s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2257: 6096-7095 Capsella grandiflora
Cagra.2257s0001 2.0kb upstream 2.0kb upstream 2880 true Scaffold2257: 3216-6095 Capsella grandiflora
Cagra.2257s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2257: 3216-5215 Capsella grandiflora
Cagra.2257s0001 2.0kb downstream 2.0kb downstream 2880 true Scaffold2257: 5216-8095 Capsella grandiflora
Cagra.2257s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2257: 6096-8095 Capsella grandiflora
Cagra.2257s0001 5.0kb upstream 5.0kb upstream 5880 true Scaffold2257: 216-6095 Capsella grandiflora
Cagra.2257s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2257: 216-5215 Capsella grandiflora
Cagra.2257s0001 5.0kb downstream 5.0kb downstream 5880 true Scaffold2257: 5216-11095 Capsella grandiflora
Cagra.2257s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2257: 6096-11095 Capsella grandiflora
Cagra.2257s0001 10.0kb upstream 10.0kb upstream 6095 true Scaffold2257: 1-6095 Capsella grandiflora
Cagra.2257s0001 10.0kb upstream 10.0kb upstream 5215 false Scaffold2257: 1-5215 Capsella grandiflora
Cagra.2257s0001 10.0kb downstream 10.0kb downstream 8627 true Scaffold2257: 5216-13842 Capsella grandiflora
Cagra.2257s0001 10.0kb downstream 10.0kb downstream 7747 false Scaffold2257: 6096-13842 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361560 5261 Brassicaceae View MSA
123835813 5264 Brassicales-Malvales View MSA
124338385 5266 SBM View MSA
124248114 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain