Gene : Cagra.2240s0004 C. grandiflora v1.1
Genomic Order:  4 Name:  ? Cagra.2240s0004
Secondary Identifier:  ? PAC:28911975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2240s0004 0.5kb upstream 0.5kb upstream 1867 true Scaffold2240: 7613-9479 Capsella grandiflora
Cagra.2240s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2240: 7613-8112 Capsella grandiflora
Cagra.2240s0004 0.5kb downstream 0.5kb downstream 1867 true Scaffold2240: 8113-9979 Capsella grandiflora
Cagra.2240s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2240: 9480-9979 Capsella grandiflora
Cagra.2240s0004 1.0kb upstream 1.0kb upstream 2367 true Scaffold2240: 7113-9479 Capsella grandiflora
Cagra.2240s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2240: 7113-8112 Capsella grandiflora
Cagra.2240s0004 1.0kb downstream 1.0kb downstream 2367 true Scaffold2240: 8113-10479 Capsella grandiflora
Cagra.2240s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2240: 9480-10479 Capsella grandiflora
Cagra.2240s0004 2.0kb upstream 2.0kb upstream 3367 true Scaffold2240: 6113-9479 Capsella grandiflora
Cagra.2240s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2240: 6113-8112 Capsella grandiflora
Cagra.2240s0004 2.0kb downstream 2.0kb downstream 3367 true Scaffold2240: 8113-11479 Capsella grandiflora
Cagra.2240s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2240: 9480-11479 Capsella grandiflora
Cagra.2240s0004 5.0kb upstream 5.0kb upstream 6367 true Scaffold2240: 3113-9479 Capsella grandiflora
Cagra.2240s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2240: 3113-8112 Capsella grandiflora
Cagra.2240s0004 5.0kb downstream 5.0kb downstream 6367 true Scaffold2240: 8113-14479 Capsella grandiflora
Cagra.2240s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2240: 9480-14479 Capsella grandiflora
Cagra.2240s0004 10.0kb upstream 10.0kb upstream 9479 true Scaffold2240: 1-9479 Capsella grandiflora
Cagra.2240s0004 10.0kb upstream 10.0kb upstream 8112 false Scaffold2240: 1-8112 Capsella grandiflora
Cagra.2240s0004 10.0kb downstream 10.0kb downstream 11367 true Scaffold2240: 8113-19479 Capsella grandiflora
Cagra.2240s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2240: 9480-19479 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363593 5261 Brassicaceae View MSA
123834589 5264 Brassicales-Malvales View MSA
124345622 5266 SBM View MSA
124251277 5268 Malvidae View MSA
124065710 5270 Rosid View MSA
123740158 5271 Pentapetalae View MSA
122793666 5272 Eudicot View MSA
122047325 5273 Angiosperm View MSA
121347888 5274 Embryophyte View MSA
123380666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain