Gene : Cagra.2240s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11652 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  10
Name:  ? Cagra.2240s0010 Secondary Identifier:  ? PAC:28912029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2240s0010 0.5kb upstream 0.5kb upstream 1852 true Scaffold2240: 27154-29005 Capsella grandiflora
Cagra.2240s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2240: 27154-27653 Capsella grandiflora
Cagra.2240s0010 0.5kb downstream 0.5kb downstream 1852 true Scaffold2240: 27654-29505 Capsella grandiflora
Cagra.2240s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2240: 29006-29505 Capsella grandiflora
Cagra.2240s0010 1.0kb upstream 1.0kb upstream 2352 true Scaffold2240: 26654-29005 Capsella grandiflora
Cagra.2240s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2240: 26654-27653 Capsella grandiflora
Cagra.2240s0010 1.0kb downstream 1.0kb downstream 2352 true Scaffold2240: 27654-30005 Capsella grandiflora
Cagra.2240s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2240: 29006-30005 Capsella grandiflora
Cagra.2240s0010 2.0kb upstream 2.0kb upstream 3352 true Scaffold2240: 25654-29005 Capsella grandiflora
Cagra.2240s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2240: 25654-27653 Capsella grandiflora
Cagra.2240s0010 2.0kb downstream 2.0kb downstream 3352 true Scaffold2240: 27654-31005 Capsella grandiflora
Cagra.2240s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2240: 29006-31005 Capsella grandiflora
Cagra.2240s0010 5.0kb upstream 5.0kb upstream 6352 true Scaffold2240: 22654-29005 Capsella grandiflora
Cagra.2240s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2240: 22654-27653 Capsella grandiflora
Cagra.2240s0010 5.0kb downstream 5.0kb downstream 6352 true Scaffold2240: 27654-34005 Capsella grandiflora
Cagra.2240s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2240: 29006-34005 Capsella grandiflora
Cagra.2240s0010 10.0kb upstream 10.0kb upstream 11352 true Scaffold2240: 17654-29005 Capsella grandiflora
Cagra.2240s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2240: 17654-27653 Capsella grandiflora
Cagra.2240s0010 10.0kb downstream 10.0kb downstream 11352 true Scaffold2240: 27654-39005 Capsella grandiflora
Cagra.2240s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2240: 29006-39005 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380824 5261 Brassicaceae View MSA
123837823 5264 Brassicales-Malvales View MSA
124350108 5266 SBM View MSA
124241018 5268 Malvidae View MSA
124070062 5270 Rosid View MSA
123740818 5271 Pentapetalae View MSA
122794573 5272 Eudicot View MSA
122046151 5273 Angiosperm View MSA
121344196 5274 Embryophyte View MSA
123424660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain