Gene : Cagra.2240s0022 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  22
Name:  ? Cagra.2240s0022 Secondary Identifier:  ? PAC:28912028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2240s0022 0.5kb upstream 0.5kb upstream 4862 true Scaffold2240: 76227-81088 Capsella grandiflora
Cagra.2240s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold2240: 76227-76726 Capsella grandiflora
Cagra.2240s0022 0.5kb downstream 0.5kb downstream 4862 true Scaffold2240: 76727-81588 Capsella grandiflora
Cagra.2240s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold2240: 81089-81588 Capsella grandiflora
Cagra.2240s0022 1.0kb upstream 1.0kb upstream 5362 true Scaffold2240: 75727-81088 Capsella grandiflora
Cagra.2240s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold2240: 75727-76726 Capsella grandiflora
Cagra.2240s0022 1.0kb downstream 1.0kb downstream 5362 true Scaffold2240: 76727-82088 Capsella grandiflora
Cagra.2240s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold2240: 81089-82088 Capsella grandiflora
Cagra.2240s0022 2.0kb upstream 2.0kb upstream 6362 true Scaffold2240: 74727-81088 Capsella grandiflora
Cagra.2240s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold2240: 74727-76726 Capsella grandiflora
Cagra.2240s0022 2.0kb downstream 2.0kb downstream 6362 true Scaffold2240: 76727-83088 Capsella grandiflora
Cagra.2240s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold2240: 81089-83088 Capsella grandiflora
Cagra.2240s0022 5.0kb upstream 5.0kb upstream 9362 true Scaffold2240: 71727-81088 Capsella grandiflora
Cagra.2240s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold2240: 71727-76726 Capsella grandiflora
Cagra.2240s0022 5.0kb downstream 5.0kb downstream 9362 true Scaffold2240: 76727-86088 Capsella grandiflora
Cagra.2240s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold2240: 81089-86088 Capsella grandiflora
Cagra.2240s0022 10.0kb upstream 10.0kb upstream 14362 true Scaffold2240: 66727-81088 Capsella grandiflora
Cagra.2240s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold2240: 66727-76726 Capsella grandiflora
Cagra.2240s0022 10.0kb downstream 10.0kb downstream 14362 true Scaffold2240: 76727-91088 Capsella grandiflora
Cagra.2240s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold2240: 81089-91088 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368087 5261 Brassicaceae View MSA
123830393 5264 Brassicales-Malvales View MSA
124336842 5266 SBM View MSA
124241892 5268 Malvidae View MSA
124068015 5270 Rosid View MSA
123738487 5271 Pentapetalae View MSA
122789712 5272 Eudicot View MSA
122044126 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121347187 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain