Gene : Cagra.2243s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B Genomic Order:  6
Name:  ? Cagra.2243s0006 Secondary Identifier:  ? PAC:28919466
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2243s0006 0.5kb upstream 0.5kb upstream 5449 true Scaffold2243: 27923-33371 Capsella grandiflora
Cagra.2243s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2243: 27923-28422 Capsella grandiflora
Cagra.2243s0006 0.5kb downstream 0.5kb downstream 5449 true Scaffold2243: 28423-33871 Capsella grandiflora
Cagra.2243s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2243: 33372-33871 Capsella grandiflora
Cagra.2243s0006 1.0kb upstream 1.0kb upstream 5949 true Scaffold2243: 27423-33371 Capsella grandiflora
Cagra.2243s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2243: 27423-28422 Capsella grandiflora
Cagra.2243s0006 1.0kb downstream 1.0kb downstream 5949 true Scaffold2243: 28423-34371 Capsella grandiflora
Cagra.2243s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2243: 33372-34371 Capsella grandiflora
Cagra.2243s0006 2.0kb upstream 2.0kb upstream 6949 true Scaffold2243: 26423-33371 Capsella grandiflora
Cagra.2243s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2243: 26423-28422 Capsella grandiflora
Cagra.2243s0006 2.0kb downstream 2.0kb downstream 6949 true Scaffold2243: 28423-35371 Capsella grandiflora
Cagra.2243s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2243: 33372-35371 Capsella grandiflora
Cagra.2243s0006 5.0kb upstream 5.0kb upstream 9949 true Scaffold2243: 23423-33371 Capsella grandiflora
Cagra.2243s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2243: 23423-28422 Capsella grandiflora
Cagra.2243s0006 5.0kb downstream 5.0kb downstream 8746 true Scaffold2243: 28423-37168 Capsella grandiflora
Cagra.2243s0006 5.0kb downstream 5.0kb downstream 3797 false Scaffold2243: 33372-37168 Capsella grandiflora
Cagra.2243s0006 10.0kb upstream 10.0kb upstream 14949 true Scaffold2243: 18423-33371 Capsella grandiflora
Cagra.2243s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2243: 18423-28422 Capsella grandiflora
Cagra.2243s0006 10.0kb downstream 10.0kb downstream 8746 true Scaffold2243: 28423-37168 Capsella grandiflora
Cagra.2243s0006 10.0kb downstream 10.0kb downstream 3797 false Scaffold2243: 33372-37168 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365194 5261 Brassicaceae View MSA
123834334 5264 Brassicales-Malvales View MSA
124342184 5266 SBM View MSA
124242885 5268 Malvidae View MSA
124062604 5270 Rosid View MSA
123736411 5271 Pentapetalae View MSA
122792021 5272 Eudicot View MSA
122045441 5273 Angiosperm View MSA
121347083 5274 Embryophyte View MSA
123424987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain