Gene : Cagra.2243s0004 C. grandiflora v1.1
Defline:  (1 of 3) KOG3036 - Protein involved in cell differentiation/sexual development Genomic Order:  4
Name:  ? Cagra.2243s0004 Secondary Identifier:  ? PAC:28919469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2243s0004 0.5kb upstream 0.5kb upstream 3408 true Scaffold2243: 22387-25794 Capsella grandiflora
Cagra.2243s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2243: 22387-22886 Capsella grandiflora
Cagra.2243s0004 0.5kb downstream 0.5kb downstream 3408 true Scaffold2243: 22887-26294 Capsella grandiflora
Cagra.2243s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2243: 25795-26294 Capsella grandiflora
Cagra.2243s0004 1.0kb upstream 1.0kb upstream 3908 true Scaffold2243: 21887-25794 Capsella grandiflora
Cagra.2243s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2243: 21887-22886 Capsella grandiflora
Cagra.2243s0004 1.0kb downstream 1.0kb downstream 3908 true Scaffold2243: 22887-26794 Capsella grandiflora
Cagra.2243s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2243: 25795-26794 Capsella grandiflora
Cagra.2243s0004 2.0kb upstream 2.0kb upstream 4908 true Scaffold2243: 20887-25794 Capsella grandiflora
Cagra.2243s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2243: 20887-22886 Capsella grandiflora
Cagra.2243s0004 2.0kb downstream 2.0kb downstream 4908 true Scaffold2243: 22887-27794 Capsella grandiflora
Cagra.2243s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2243: 25795-27794 Capsella grandiflora
Cagra.2243s0004 5.0kb upstream 5.0kb upstream 7908 true Scaffold2243: 17887-25794 Capsella grandiflora
Cagra.2243s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2243: 17887-22886 Capsella grandiflora
Cagra.2243s0004 5.0kb downstream 5.0kb downstream 7908 true Scaffold2243: 22887-30794 Capsella grandiflora
Cagra.2243s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2243: 25795-30794 Capsella grandiflora
Cagra.2243s0004 10.0kb upstream 10.0kb upstream 12908 true Scaffold2243: 12887-25794 Capsella grandiflora
Cagra.2243s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2243: 12887-22886 Capsella grandiflora
Cagra.2243s0004 10.0kb downstream 10.0kb downstream 12908 true Scaffold2243: 22887-35794 Capsella grandiflora
Cagra.2243s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2243: 25795-35794 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364634 5261 Brassicaceae View MSA
123834011 5264 Brassicales-Malvales View MSA
124343291 5266 SBM View MSA
124237705 5268 Malvidae View MSA
124066186 5270 Rosid View MSA
123748122 5271 Pentapetalae View MSA
122792853 5272 Eudicot View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain