Gene : Cagra.2248s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR28052:SF1 - UPF0545 PROTEIN C22ORF39 Genomic Order:  6
Name:  ? Cagra.2248s0006 Secondary Identifier:  ? PAC:28918005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2248s0006 0.5kb upstream 0.5kb upstream 1982 true Scaffold2248: 9579-11560 Capsella grandiflora
Cagra.2248s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2248: 11061-11560 Capsella grandiflora
Cagra.2248s0006 0.5kb downstream 0.5kb downstream 1982 true Scaffold2248: 9079-11060 Capsella grandiflora
Cagra.2248s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2248: 9079-9578 Capsella grandiflora
Cagra.2248s0006 1.0kb upstream 1.0kb upstream 2482 true Scaffold2248: 9579-12060 Capsella grandiflora
Cagra.2248s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2248: 11061-12060 Capsella grandiflora
Cagra.2248s0006 1.0kb downstream 1.0kb downstream 2482 true Scaffold2248: 8579-11060 Capsella grandiflora
Cagra.2248s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2248: 8579-9578 Capsella grandiflora
Cagra.2248s0006 2.0kb upstream 2.0kb upstream 3482 true Scaffold2248: 9579-13060 Capsella grandiflora
Cagra.2248s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2248: 11061-13060 Capsella grandiflora
Cagra.2248s0006 2.0kb downstream 2.0kb downstream 3482 true Scaffold2248: 7579-11060 Capsella grandiflora
Cagra.2248s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2248: 7579-9578 Capsella grandiflora
Cagra.2248s0006 5.0kb upstream 5.0kb upstream 6482 true Scaffold2248: 9579-16060 Capsella grandiflora
Cagra.2248s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2248: 11061-16060 Capsella grandiflora
Cagra.2248s0006 5.0kb downstream 5.0kb downstream 6482 true Scaffold2248: 4579-11060 Capsella grandiflora
Cagra.2248s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2248: 4579-9578 Capsella grandiflora
Cagra.2248s0006 10.0kb upstream 10.0kb upstream 11482 true Scaffold2248: 9579-21060 Capsella grandiflora
Cagra.2248s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2248: 11061-21060 Capsella grandiflora
Cagra.2248s0006 10.0kb downstream 10.0kb downstream 11060 true Scaffold2248: 1-11060 Capsella grandiflora
Cagra.2248s0006 10.0kb downstream 10.0kb downstream 9578 false Scaffold2248: 1-9578 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333153 5261 Brassicaceae Singleton cluster - no MSA
123841530 5264 Brassicales-Malvales View MSA
124339355 5266 SBM View MSA
124251672 5268 Malvidae View MSA
124067499 5270 Rosid View MSA
123746136 5271 Pentapetalae View MSA
122790093 5272 Eudicot View MSA
122047882 5273 Angiosperm View MSA
121343967 5274 Embryophyte View MSA
123425812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain