Gene : Cagra.2248s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  9
Name:  ? Cagra.2248s0009 Secondary Identifier:  ? PAC:28917995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2248s0009 0.5kb upstream 0.5kb upstream 3590 true Scaffold2248: 19253-22842 Capsella grandiflora
Cagra.2248s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2248: 22343-22842 Capsella grandiflora
Cagra.2248s0009 0.5kb downstream 0.5kb downstream 3590 true Scaffold2248: 18753-22342 Capsella grandiflora
Cagra.2248s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2248: 18753-19252 Capsella grandiflora
Cagra.2248s0009 1.0kb upstream 1.0kb upstream 4090 true Scaffold2248: 19253-23342 Capsella grandiflora
Cagra.2248s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2248: 22343-23342 Capsella grandiflora
Cagra.2248s0009 1.0kb downstream 1.0kb downstream 4090 true Scaffold2248: 18253-22342 Capsella grandiflora
Cagra.2248s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2248: 18253-19252 Capsella grandiflora
Cagra.2248s0009 2.0kb upstream 2.0kb upstream 5090 true Scaffold2248: 19253-24342 Capsella grandiflora
Cagra.2248s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2248: 22343-24342 Capsella grandiflora
Cagra.2248s0009 2.0kb downstream 2.0kb downstream 5090 true Scaffold2248: 17253-22342 Capsella grandiflora
Cagra.2248s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2248: 17253-19252 Capsella grandiflora
Cagra.2248s0009 5.0kb upstream 5.0kb upstream 8090 true Scaffold2248: 19253-27342 Capsella grandiflora
Cagra.2248s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2248: 22343-27342 Capsella grandiflora
Cagra.2248s0009 5.0kb downstream 5.0kb downstream 8090 true Scaffold2248: 14253-22342 Capsella grandiflora
Cagra.2248s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2248: 14253-19252 Capsella grandiflora
Cagra.2248s0009 10.0kb upstream 10.0kb upstream 13090 true Scaffold2248: 19253-32342 Capsella grandiflora
Cagra.2248s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2248: 22343-32342 Capsella grandiflora
Cagra.2248s0009 10.0kb downstream 10.0kb downstream 13090 true Scaffold2248: 9253-22342 Capsella grandiflora
Cagra.2248s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2248: 9253-19252 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377087 5261 Brassicaceae View MSA
123832128 5264 Brassicales-Malvales View MSA
124346402 5266 SBM View MSA
124239451 5268 Malvidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain