Gene : Cagra.2248s0019 C. grandiflora v1.1
Defline:  (1 of 12) PF14383 - DUF761-associated sequence motif (VARLMGL) Genomic Order:  19
Name:  ? Cagra.2248s0019 Secondary Identifier:  ? PAC:28917992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2248s0019 0.5kb upstream 0.5kb upstream 2105 true Scaffold2248: 60420-62524 Capsella grandiflora
Cagra.2248s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold2248: 60420-60919 Capsella grandiflora
Cagra.2248s0019 0.5kb downstream 0.5kb downstream 2105 true Scaffold2248: 60920-63024 Capsella grandiflora
Cagra.2248s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold2248: 62525-63024 Capsella grandiflora
Cagra.2248s0019 1.0kb upstream 1.0kb upstream 2605 true Scaffold2248: 59920-62524 Capsella grandiflora
Cagra.2248s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold2248: 59920-60919 Capsella grandiflora
Cagra.2248s0019 1.0kb downstream 1.0kb downstream 2605 true Scaffold2248: 60920-63524 Capsella grandiflora
Cagra.2248s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold2248: 62525-63524 Capsella grandiflora
Cagra.2248s0019 2.0kb upstream 2.0kb upstream 3605 true Scaffold2248: 58920-62524 Capsella grandiflora
Cagra.2248s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold2248: 58920-60919 Capsella grandiflora
Cagra.2248s0019 2.0kb downstream 2.0kb downstream 3605 true Scaffold2248: 60920-64524 Capsella grandiflora
Cagra.2248s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold2248: 62525-64524 Capsella grandiflora
Cagra.2248s0019 5.0kb upstream 5.0kb upstream 6605 true Scaffold2248: 55920-62524 Capsella grandiflora
Cagra.2248s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold2248: 55920-60919 Capsella grandiflora
Cagra.2248s0019 5.0kb downstream 5.0kb downstream 6605 true Scaffold2248: 60920-67524 Capsella grandiflora
Cagra.2248s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold2248: 62525-67524 Capsella grandiflora
Cagra.2248s0019 10.0kb upstream 10.0kb upstream 11605 true Scaffold2248: 50920-62524 Capsella grandiflora
Cagra.2248s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold2248: 50920-60919 Capsella grandiflora
Cagra.2248s0019 10.0kb downstream 10.0kb downstream 11605 true Scaffold2248: 60920-72524 Capsella grandiflora
Cagra.2248s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold2248: 62525-72524 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361214 5261 Brassicaceae View MSA
123798118 5264 Brassicales-Malvales View MSA
124295794 5266 SBM View MSA
124148136 5268 Malvidae View MSA
123874193 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain