Gene : Cagra.2238s0029 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  29
Name:  ? Cagra.2238s0029 Secondary Identifier:  ? PAC:28918285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0029 0.5kb upstream 0.5kb upstream 5263 true Scaffold2238: 80267-85529 Capsella grandiflora
Cagra.2238s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 85030-85529 Capsella grandiflora
Cagra.2238s0029 0.5kb downstream 0.5kb downstream 5263 true Scaffold2238: 79767-85029 Capsella grandiflora
Cagra.2238s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 79767-80266 Capsella grandiflora
Cagra.2238s0029 1.0kb upstream 1.0kb upstream 5763 true Scaffold2238: 80267-86029 Capsella grandiflora
Cagra.2238s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 85030-86029 Capsella grandiflora
Cagra.2238s0029 1.0kb downstream 1.0kb downstream 5763 true Scaffold2238: 79267-85029 Capsella grandiflora
Cagra.2238s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 79267-80266 Capsella grandiflora
Cagra.2238s0029 2.0kb upstream 2.0kb upstream 6763 true Scaffold2238: 80267-87029 Capsella grandiflora
Cagra.2238s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 85030-87029 Capsella grandiflora
Cagra.2238s0029 2.0kb downstream 2.0kb downstream 6763 true Scaffold2238: 78267-85029 Capsella grandiflora
Cagra.2238s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 78267-80266 Capsella grandiflora
Cagra.2238s0029 5.0kb upstream 5.0kb upstream 9763 true Scaffold2238: 80267-90029 Capsella grandiflora
Cagra.2238s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 85030-90029 Capsella grandiflora
Cagra.2238s0029 5.0kb downstream 5.0kb downstream 9763 true Scaffold2238: 75267-85029 Capsella grandiflora
Cagra.2238s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 75267-80266 Capsella grandiflora
Cagra.2238s0029 10.0kb upstream 10.0kb upstream 14763 true Scaffold2238: 80267-95029 Capsella grandiflora
Cagra.2238s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 85030-95029 Capsella grandiflora
Cagra.2238s0029 10.0kb downstream 10.0kb downstream 14763 true Scaffold2238: 70267-85029 Capsella grandiflora
Cagra.2238s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 70267-80266 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367969 5261 Brassicaceae View MSA
123838757 5264 Brassicales-Malvales View MSA
124322495 5266 SBM View MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain