Gene : Cagra.2238s0028 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF404 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  28
Name:  ? Cagra.2238s0028 Secondary Identifier:  ? PAC:28918220
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0028 0.5kb upstream 0.5kb upstream 3748 true Scaffold2238: 76332-80079 Capsella grandiflora
Cagra.2238s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 79580-80079 Capsella grandiflora
Cagra.2238s0028 0.5kb downstream 0.5kb downstream 3748 true Scaffold2238: 75832-79579 Capsella grandiflora
Cagra.2238s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 75832-76331 Capsella grandiflora
Cagra.2238s0028 1.0kb upstream 1.0kb upstream 4248 true Scaffold2238: 76332-80579 Capsella grandiflora
Cagra.2238s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 79580-80579 Capsella grandiflora
Cagra.2238s0028 1.0kb downstream 1.0kb downstream 4248 true Scaffold2238: 75332-79579 Capsella grandiflora
Cagra.2238s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 75332-76331 Capsella grandiflora
Cagra.2238s0028 2.0kb upstream 2.0kb upstream 5248 true Scaffold2238: 76332-81579 Capsella grandiflora
Cagra.2238s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 79580-81579 Capsella grandiflora
Cagra.2238s0028 2.0kb downstream 2.0kb downstream 5248 true Scaffold2238: 74332-79579 Capsella grandiflora
Cagra.2238s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 74332-76331 Capsella grandiflora
Cagra.2238s0028 5.0kb upstream 5.0kb upstream 8248 true Scaffold2238: 76332-84579 Capsella grandiflora
Cagra.2238s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 79580-84579 Capsella grandiflora
Cagra.2238s0028 5.0kb downstream 5.0kb downstream 8248 true Scaffold2238: 71332-79579 Capsella grandiflora
Cagra.2238s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 71332-76331 Capsella grandiflora
Cagra.2238s0028 10.0kb upstream 10.0kb upstream 13248 true Scaffold2238: 76332-89579 Capsella grandiflora
Cagra.2238s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 79580-89579 Capsella grandiflora
Cagra.2238s0028 10.0kb downstream 10.0kb downstream 13248 true Scaffold2238: 66332-79579 Capsella grandiflora
Cagra.2238s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 66332-76331 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122380734 5261 Brassicaceae View MSA
123829409 5264 Brassicales-Malvales View MSA
124344604 5266 SBM View MSA
124243551 5268 Malvidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain