Gene : Cagra.2238s0040 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21649:SF2 - CHLOROPHYLL A-B BINDING PROTEIN Genomic Order:  40
Name:  ? Cagra.2238s0040 Secondary Identifier:  ? PAC:28918272
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0040 0.5kb upstream 0.5kb upstream 1664 true Scaffold2238: 112345-114008 Capsella grandiflora
Cagra.2238s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 112345-112844 Capsella grandiflora
Cagra.2238s0040 0.5kb downstream 0.5kb downstream 1664 true Scaffold2238: 112845-114508 Capsella grandiflora
Cagra.2238s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 114009-114508 Capsella grandiflora
Cagra.2238s0040 1.0kb upstream 1.0kb upstream 2164 true Scaffold2238: 111845-114008 Capsella grandiflora
Cagra.2238s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 111845-112844 Capsella grandiflora
Cagra.2238s0040 1.0kb downstream 1.0kb downstream 2164 true Scaffold2238: 112845-115008 Capsella grandiflora
Cagra.2238s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 114009-115008 Capsella grandiflora
Cagra.2238s0040 2.0kb upstream 2.0kb upstream 3164 true Scaffold2238: 110845-114008 Capsella grandiflora
Cagra.2238s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 110845-112844 Capsella grandiflora
Cagra.2238s0040 2.0kb downstream 2.0kb downstream 3164 true Scaffold2238: 112845-116008 Capsella grandiflora
Cagra.2238s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 114009-116008 Capsella grandiflora
Cagra.2238s0040 5.0kb upstream 5.0kb upstream 6164 true Scaffold2238: 107845-114008 Capsella grandiflora
Cagra.2238s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 107845-112844 Capsella grandiflora
Cagra.2238s0040 5.0kb downstream 5.0kb downstream 6164 true Scaffold2238: 112845-119008 Capsella grandiflora
Cagra.2238s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 114009-119008 Capsella grandiflora
Cagra.2238s0040 10.0kb upstream 10.0kb upstream 11164 true Scaffold2238: 102845-114008 Capsella grandiflora
Cagra.2238s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 102845-112844 Capsella grandiflora
Cagra.2238s0040 10.0kb downstream 10.0kb downstream 11164 true Scaffold2238: 112845-124008 Capsella grandiflora
Cagra.2238s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 114009-124008 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370049 5261 Brassicaceae View MSA
123841189 5264 Brassicales-Malvales View MSA
124345557 5266 SBM View MSA
124238758 5268 Malvidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain