Gene : Cagra.2238s0049 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  49
Name:  ? Cagra.2238s0049 Secondary Identifier:  ? PAC:28918256
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0049 0.5kb upstream 0.5kb upstream 6683 true Scaffold2238: 143918-150600 Capsella grandiflora
Cagra.2238s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 143918-144417 Capsella grandiflora
Cagra.2238s0049 0.5kb downstream 0.5kb downstream 6683 true Scaffold2238: 144418-151100 Capsella grandiflora
Cagra.2238s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 150601-151100 Capsella grandiflora
Cagra.2238s0049 1.0kb upstream 1.0kb upstream 7183 true Scaffold2238: 143418-150600 Capsella grandiflora
Cagra.2238s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 143418-144417 Capsella grandiflora
Cagra.2238s0049 1.0kb downstream 1.0kb downstream 7183 true Scaffold2238: 144418-151600 Capsella grandiflora
Cagra.2238s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 150601-151600 Capsella grandiflora
Cagra.2238s0049 2.0kb upstream 2.0kb upstream 8183 true Scaffold2238: 142418-150600 Capsella grandiflora
Cagra.2238s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 142418-144417 Capsella grandiflora
Cagra.2238s0049 2.0kb downstream 2.0kb downstream 8183 true Scaffold2238: 144418-152600 Capsella grandiflora
Cagra.2238s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 150601-152600 Capsella grandiflora
Cagra.2238s0049 5.0kb upstream 5.0kb upstream 11183 true Scaffold2238: 139418-150600 Capsella grandiflora
Cagra.2238s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 139418-144417 Capsella grandiflora
Cagra.2238s0049 5.0kb downstream 5.0kb downstream 11183 true Scaffold2238: 144418-155600 Capsella grandiflora
Cagra.2238s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 150601-155600 Capsella grandiflora
Cagra.2238s0049 10.0kb upstream 10.0kb upstream 16183 true Scaffold2238: 134418-150600 Capsella grandiflora
Cagra.2238s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 134418-144417 Capsella grandiflora
Cagra.2238s0049 10.0kb downstream 10.0kb downstream 16183 true Scaffold2238: 144418-160600 Capsella grandiflora
Cagra.2238s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 150601-160600 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380809 5261 Brassicaceae View MSA
123831022 5264 Brassicales-Malvales View MSA
124338256 5266 SBM View MSA
124249364 5268 Malvidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain