Gene : Cagra.2238s0092 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  92
Name:  ? Cagra.2238s0092 Secondary Identifier:  ? PAC:28918228
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0092 0.5kb upstream 0.5kb upstream 8723 true Scaffold2238: 290123-298845 Capsella grandiflora
Cagra.2238s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 290123-290622 Capsella grandiflora
Cagra.2238s0092 0.5kb downstream 0.5kb downstream 8723 true Scaffold2238: 290623-299345 Capsella grandiflora
Cagra.2238s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 298846-299345 Capsella grandiflora
Cagra.2238s0092 1.0kb upstream 1.0kb upstream 9223 true Scaffold2238: 289623-298845 Capsella grandiflora
Cagra.2238s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 289623-290622 Capsella grandiflora
Cagra.2238s0092 1.0kb downstream 1.0kb downstream 9223 true Scaffold2238: 290623-299845 Capsella grandiflora
Cagra.2238s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 298846-299845 Capsella grandiflora
Cagra.2238s0092 2.0kb upstream 2.0kb upstream 10223 true Scaffold2238: 288623-298845 Capsella grandiflora
Cagra.2238s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 288623-290622 Capsella grandiflora
Cagra.2238s0092 2.0kb downstream 2.0kb downstream 10223 true Scaffold2238: 290623-300845 Capsella grandiflora
Cagra.2238s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 298846-300845 Capsella grandiflora
Cagra.2238s0092 5.0kb upstream 5.0kb upstream 13223 true Scaffold2238: 285623-298845 Capsella grandiflora
Cagra.2238s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 285623-290622 Capsella grandiflora
Cagra.2238s0092 5.0kb downstream 5.0kb downstream 13223 true Scaffold2238: 290623-303845 Capsella grandiflora
Cagra.2238s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 298846-303845 Capsella grandiflora
Cagra.2238s0092 10.0kb upstream 10.0kb upstream 18223 true Scaffold2238: 280623-298845 Capsella grandiflora
Cagra.2238s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 280623-290622 Capsella grandiflora
Cagra.2238s0092 10.0kb downstream 10.0kb downstream 18223 true Scaffold2238: 290623-308845 Capsella grandiflora
Cagra.2238s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 298846-308845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369106 5261 Brassicaceae View MSA
123832970 5264 Brassicales-Malvales View MSA
124346506 5266 SBM View MSA
124243651 5268 Malvidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain