Gene : Cagra.2235s0012 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23180:SF268 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  12
Name:  ? Cagra.2235s0012 Secondary Identifier:  ? PAC:28907714
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2235s0012 0.5kb upstream 0.5kb upstream 1197 true Scaffold2235: 52711-53907 Capsella grandiflora
Cagra.2235s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2235: 53408-53907 Capsella grandiflora
Cagra.2235s0012 0.5kb downstream 0.5kb downstream 1197 true Scaffold2235: 52211-53407 Capsella grandiflora
Cagra.2235s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2235: 52211-52710 Capsella grandiflora
Cagra.2235s0012 1.0kb upstream 1.0kb upstream 1697 true Scaffold2235: 52711-54407 Capsella grandiflora
Cagra.2235s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2235: 53408-54407 Capsella grandiflora
Cagra.2235s0012 1.0kb downstream 1.0kb downstream 1697 true Scaffold2235: 51711-53407 Capsella grandiflora
Cagra.2235s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2235: 51711-52710 Capsella grandiflora
Cagra.2235s0012 2.0kb upstream 2.0kb upstream 2697 true Scaffold2235: 52711-55407 Capsella grandiflora
Cagra.2235s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2235: 53408-55407 Capsella grandiflora
Cagra.2235s0012 2.0kb downstream 2.0kb downstream 2697 true Scaffold2235: 50711-53407 Capsella grandiflora
Cagra.2235s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2235: 50711-52710 Capsella grandiflora
Cagra.2235s0012 5.0kb upstream 5.0kb upstream 5697 true Scaffold2235: 52711-58407 Capsella grandiflora
Cagra.2235s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2235: 53408-58407 Capsella grandiflora
Cagra.2235s0012 5.0kb downstream 5.0kb downstream 5697 true Scaffold2235: 47711-53407 Capsella grandiflora
Cagra.2235s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2235: 47711-52710 Capsella grandiflora
Cagra.2235s0012 10.0kb upstream 10.0kb upstream 10697 true Scaffold2235: 52711-63407 Capsella grandiflora
Cagra.2235s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2235: 53408-63407 Capsella grandiflora
Cagra.2235s0012 10.0kb downstream 10.0kb downstream 10697 true Scaffold2235: 42711-53407 Capsella grandiflora
Cagra.2235s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2235: 42711-52710 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381583 5261 Brassicaceae View MSA
123837188 5264 Brassicales-Malvales View MSA
124341901 5266 SBM View MSA
124249736 5268 Malvidae View MSA
124073070 5270 Rosid View MSA
123750672 5271 Pentapetalae View MSA
122773790 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain