Gene : Cagra.2235s0010 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  10
Name:  ? Cagra.2235s0010 Secondary Identifier:  ? PAC:28907729
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2235s0010 0.5kb upstream 0.5kb upstream 3220 true Scaffold2235: 41720-44939 Capsella grandiflora
Cagra.2235s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2235: 44440-44939 Capsella grandiflora
Cagra.2235s0010 0.5kb downstream 0.5kb downstream 3220 true Scaffold2235: 41220-44439 Capsella grandiflora
Cagra.2235s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2235: 41220-41719 Capsella grandiflora
Cagra.2235s0010 1.0kb upstream 1.0kb upstream 3720 true Scaffold2235: 41720-45439 Capsella grandiflora
Cagra.2235s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2235: 44440-45439 Capsella grandiflora
Cagra.2235s0010 1.0kb downstream 1.0kb downstream 3720 true Scaffold2235: 40720-44439 Capsella grandiflora
Cagra.2235s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2235: 40720-41719 Capsella grandiflora
Cagra.2235s0010 2.0kb upstream 2.0kb upstream 4720 true Scaffold2235: 41720-46439 Capsella grandiflora
Cagra.2235s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2235: 44440-46439 Capsella grandiflora
Cagra.2235s0010 2.0kb downstream 2.0kb downstream 4720 true Scaffold2235: 39720-44439 Capsella grandiflora
Cagra.2235s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2235: 39720-41719 Capsella grandiflora
Cagra.2235s0010 5.0kb upstream 5.0kb upstream 7720 true Scaffold2235: 41720-49439 Capsella grandiflora
Cagra.2235s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2235: 44440-49439 Capsella grandiflora
Cagra.2235s0010 5.0kb downstream 5.0kb downstream 7720 true Scaffold2235: 36720-44439 Capsella grandiflora
Cagra.2235s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2235: 36720-41719 Capsella grandiflora
Cagra.2235s0010 10.0kb upstream 10.0kb upstream 12720 true Scaffold2235: 41720-54439 Capsella grandiflora
Cagra.2235s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2235: 44440-54439 Capsella grandiflora
Cagra.2235s0010 10.0kb downstream 10.0kb downstream 12720 true Scaffold2235: 31720-44439 Capsella grandiflora
Cagra.2235s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2235: 31720-41719 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369960 5261 Brassicaceae View MSA
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain