Gene : Cagra.2235s0035 C. grandiflora v1.1
Defline:  (1 of 5) KOG4473 - Uncharacterized membrane protein Genomic Order:  35
Name:  ? Cagra.2235s0035 Secondary Identifier:  ? PAC:28907711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2235s0035 0.5kb upstream 0.5kb upstream 2171 true Scaffold2235: 135698-137868 Capsella grandiflora
Cagra.2235s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold2235: 137369-137868 Capsella grandiflora
Cagra.2235s0035 0.5kb downstream 0.5kb downstream 2171 true Scaffold2235: 135198-137368 Capsella grandiflora
Cagra.2235s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold2235: 135198-135697 Capsella grandiflora
Cagra.2235s0035 1.0kb upstream 1.0kb upstream 2671 true Scaffold2235: 135698-138368 Capsella grandiflora
Cagra.2235s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold2235: 137369-138368 Capsella grandiflora
Cagra.2235s0035 1.0kb downstream 1.0kb downstream 2671 true Scaffold2235: 134698-137368 Capsella grandiflora
Cagra.2235s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold2235: 134698-135697 Capsella grandiflora
Cagra.2235s0035 2.0kb upstream 2.0kb upstream 3671 true Scaffold2235: 135698-139368 Capsella grandiflora
Cagra.2235s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold2235: 137369-139368 Capsella grandiflora
Cagra.2235s0035 2.0kb downstream 2.0kb downstream 3671 true Scaffold2235: 133698-137368 Capsella grandiflora
Cagra.2235s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold2235: 133698-135697 Capsella grandiflora
Cagra.2235s0035 5.0kb upstream 5.0kb upstream 6671 true Scaffold2235: 135698-142368 Capsella grandiflora
Cagra.2235s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold2235: 137369-142368 Capsella grandiflora
Cagra.2235s0035 5.0kb downstream 5.0kb downstream 6671 true Scaffold2235: 130698-137368 Capsella grandiflora
Cagra.2235s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold2235: 130698-135697 Capsella grandiflora
Cagra.2235s0035 10.0kb upstream 10.0kb upstream 11671 true Scaffold2235: 135698-147368 Capsella grandiflora
Cagra.2235s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold2235: 137369-147368 Capsella grandiflora
Cagra.2235s0035 10.0kb downstream 10.0kb downstream 11671 true Scaffold2235: 125698-137368 Capsella grandiflora
Cagra.2235s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold2235: 125698-135697 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367912 5261 Brassicaceae View MSA
123827765 5264 Brassicales-Malvales View MSA
124336775 5266 SBM View MSA
124238624 5268 Malvidae View MSA
124062648 5270 Rosid View MSA
123736960 5271 Pentapetalae View MSA
122790117 5272 Eudicot View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain