Gene : Cagra.2236s0012 C. grandiflora v1.1
Defline:  (1 of 5) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  12
Name:  ? Cagra.2236s0012 Secondary Identifier:  ? PAC:28906622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0012 0.5kb upstream 0.5kb upstream 1879 true Scaffold2236: 50313-52191 Capsella grandiflora
Cagra.2236s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 50313-50812 Capsella grandiflora
Cagra.2236s0012 0.5kb downstream 0.5kb downstream 1879 true Scaffold2236: 50813-52691 Capsella grandiflora
Cagra.2236s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 52192-52691 Capsella grandiflora
Cagra.2236s0012 1.0kb upstream 1.0kb upstream 2379 true Scaffold2236: 49813-52191 Capsella grandiflora
Cagra.2236s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 49813-50812 Capsella grandiflora
Cagra.2236s0012 1.0kb downstream 1.0kb downstream 2379 true Scaffold2236: 50813-53191 Capsella grandiflora
Cagra.2236s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 52192-53191 Capsella grandiflora
Cagra.2236s0012 2.0kb upstream 2.0kb upstream 3379 true Scaffold2236: 48813-52191 Capsella grandiflora
Cagra.2236s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 48813-50812 Capsella grandiflora
Cagra.2236s0012 2.0kb downstream 2.0kb downstream 3379 true Scaffold2236: 50813-54191 Capsella grandiflora
Cagra.2236s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 52192-54191 Capsella grandiflora
Cagra.2236s0012 5.0kb upstream 5.0kb upstream 6379 true Scaffold2236: 45813-52191 Capsella grandiflora
Cagra.2236s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 45813-50812 Capsella grandiflora
Cagra.2236s0012 5.0kb downstream 5.0kb downstream 6379 true Scaffold2236: 50813-57191 Capsella grandiflora
Cagra.2236s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 52192-57191 Capsella grandiflora
Cagra.2236s0012 10.0kb upstream 10.0kb upstream 11379 true Scaffold2236: 40813-52191 Capsella grandiflora
Cagra.2236s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 40813-50812 Capsella grandiflora
Cagra.2236s0012 10.0kb downstream 10.0kb downstream 11379 true Scaffold2236: 50813-62191 Capsella grandiflora
Cagra.2236s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 52192-62191 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333140 5261 Brassicaceae Singleton cluster - no MSA
123774121 5264 Brassicales-Malvales Singleton cluster - no MSA
124272575 5266 SBM Singleton cluster - no MSA
124249694 5268 Malvidae View MSA
123952403 5270 Rosid View MSA
123752604 5271 Pentapetalae View MSA
122774668 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain