Gene : Cagra.2236s0028 C. grandiflora v1.1
Defline:  (1 of 410) PF13041 - PPR repeat family (PPR_2) Genomic Order:  28
Name:  ? Cagra.2236s0028 Secondary Identifier:  ? PAC:28906575
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0028 0.5kb upstream 0.5kb upstream 3693 true Scaffold2236: 100111-103803 Capsella grandiflora
Cagra.2236s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 103304-103803 Capsella grandiflora
Cagra.2236s0028 0.5kb downstream 0.5kb downstream 3693 true Scaffold2236: 99611-103303 Capsella grandiflora
Cagra.2236s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 99611-100110 Capsella grandiflora
Cagra.2236s0028 1.0kb upstream 1.0kb upstream 4193 true Scaffold2236: 100111-104303 Capsella grandiflora
Cagra.2236s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 103304-104303 Capsella grandiflora
Cagra.2236s0028 1.0kb downstream 1.0kb downstream 4193 true Scaffold2236: 99111-103303 Capsella grandiflora
Cagra.2236s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 99111-100110 Capsella grandiflora
Cagra.2236s0028 2.0kb upstream 2.0kb upstream 5193 true Scaffold2236: 100111-105303 Capsella grandiflora
Cagra.2236s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 103304-105303 Capsella grandiflora
Cagra.2236s0028 2.0kb downstream 2.0kb downstream 5193 true Scaffold2236: 98111-103303 Capsella grandiflora
Cagra.2236s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 98111-100110 Capsella grandiflora
Cagra.2236s0028 5.0kb upstream 5.0kb upstream 8193 true Scaffold2236: 100111-108303 Capsella grandiflora
Cagra.2236s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 103304-108303 Capsella grandiflora
Cagra.2236s0028 5.0kb downstream 5.0kb downstream 8193 true Scaffold2236: 95111-103303 Capsella grandiflora
Cagra.2236s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 95111-100110 Capsella grandiflora
Cagra.2236s0028 10.0kb upstream 10.0kb upstream 13193 true Scaffold2236: 100111-113303 Capsella grandiflora
Cagra.2236s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 103304-113303 Capsella grandiflora
Cagra.2236s0028 10.0kb downstream 10.0kb downstream 13193 true Scaffold2236: 90111-103303 Capsella grandiflora
Cagra.2236s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 90111-100110 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362682 5261 Brassicaceae View MSA
123832052 5264 Brassicales-Malvales View MSA
124345541 5266 SBM View MSA
124242248 5268 Malvidae View MSA
124067995 5270 Rosid View MSA
123737960 5271 Pentapetalae View MSA
122786713 5272 Eudicot View MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain