Gene : Cagra.2236s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24073:SF597 - RAS-RELATED PROTEIN RABB1B Genomic Order:  27
Name:  ? Cagra.2236s0027 Secondary Identifier:  ? PAC:28906612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0027 0.5kb upstream 0.5kb upstream 3119 true Scaffold2236: 97091-100209 Capsella grandiflora
Cagra.2236s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 97091-97590 Capsella grandiflora
Cagra.2236s0027 0.5kb downstream 0.5kb downstream 3119 true Scaffold2236: 97591-100709 Capsella grandiflora
Cagra.2236s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 100210-100709 Capsella grandiflora
Cagra.2236s0027 1.0kb upstream 1.0kb upstream 3619 true Scaffold2236: 96591-100209 Capsella grandiflora
Cagra.2236s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 96591-97590 Capsella grandiflora
Cagra.2236s0027 1.0kb downstream 1.0kb downstream 3619 true Scaffold2236: 97591-101209 Capsella grandiflora
Cagra.2236s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 100210-101209 Capsella grandiflora
Cagra.2236s0027 2.0kb upstream 2.0kb upstream 4619 true Scaffold2236: 95591-100209 Capsella grandiflora
Cagra.2236s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 95591-97590 Capsella grandiflora
Cagra.2236s0027 2.0kb downstream 2.0kb downstream 4619 true Scaffold2236: 97591-102209 Capsella grandiflora
Cagra.2236s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 100210-102209 Capsella grandiflora
Cagra.2236s0027 5.0kb upstream 5.0kb upstream 7619 true Scaffold2236: 92591-100209 Capsella grandiflora
Cagra.2236s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 92591-97590 Capsella grandiflora
Cagra.2236s0027 5.0kb downstream 5.0kb downstream 7619 true Scaffold2236: 97591-105209 Capsella grandiflora
Cagra.2236s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 100210-105209 Capsella grandiflora
Cagra.2236s0027 10.0kb upstream 10.0kb upstream 12619 true Scaffold2236: 87591-100209 Capsella grandiflora
Cagra.2236s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 87591-97590 Capsella grandiflora
Cagra.2236s0027 10.0kb downstream 10.0kb downstream 12619 true Scaffold2236: 97591-110209 Capsella grandiflora
Cagra.2236s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 100210-110209 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377569 5261 Brassicaceae View MSA
123833726 5264 Brassicales-Malvales View MSA
124341748 5266 SBM View MSA
124242451 5268 Malvidae View MSA
124067006 5270 Rosid View MSA
123745328 5271 Pentapetalae View MSA
122797849 5272 Eudicot View MSA
122043695 5273 Angiosperm View MSA
121349962 5274 Embryophyte View MSA
123426577 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain