Gene : Cagra.2236s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  34
Name:  ? Cagra.2236s0034 Secondary Identifier:  ? PAC:28906614
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3561 Capsella grandiflora pathologic  
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0034 0.5kb upstream 0.5kb upstream 4630 true Scaffold2236: 127500-132129 Capsella grandiflora
Cagra.2236s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 127500-127999 Capsella grandiflora
Cagra.2236s0034 0.5kb downstream 0.5kb downstream 4630 true Scaffold2236: 128000-132629 Capsella grandiflora
Cagra.2236s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 132130-132629 Capsella grandiflora
Cagra.2236s0034 1.0kb upstream 1.0kb upstream 5130 true Scaffold2236: 127000-132129 Capsella grandiflora
Cagra.2236s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 127000-127999 Capsella grandiflora
Cagra.2236s0034 1.0kb downstream 1.0kb downstream 5130 true Scaffold2236: 128000-133129 Capsella grandiflora
Cagra.2236s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 132130-133129 Capsella grandiflora
Cagra.2236s0034 2.0kb upstream 2.0kb upstream 6130 true Scaffold2236: 126000-132129 Capsella grandiflora
Cagra.2236s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 126000-127999 Capsella grandiflora
Cagra.2236s0034 2.0kb downstream 2.0kb downstream 6130 true Scaffold2236: 128000-134129 Capsella grandiflora
Cagra.2236s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 132130-134129 Capsella grandiflora
Cagra.2236s0034 5.0kb upstream 5.0kb upstream 9130 true Scaffold2236: 123000-132129 Capsella grandiflora
Cagra.2236s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 123000-127999 Capsella grandiflora
Cagra.2236s0034 5.0kb downstream 5.0kb downstream 9130 true Scaffold2236: 128000-137129 Capsella grandiflora
Cagra.2236s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 132130-137129 Capsella grandiflora
Cagra.2236s0034 10.0kb upstream 10.0kb upstream 14130 true Scaffold2236: 118000-132129 Capsella grandiflora
Cagra.2236s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 118000-127999 Capsella grandiflora
Cagra.2236s0034 10.0kb downstream 10.0kb downstream 14130 true Scaffold2236: 128000-142129 Capsella grandiflora
Cagra.2236s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 132130-142129 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373101 5261 Brassicaceae View MSA
123831144 5264 Brassicales-Malvales View MSA
124343359 5266 SBM View MSA
124240959 5268 Malvidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain