Gene : Cagra.2238s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  6
Name:  ? Cagra.2238s0006 Secondary Identifier:  ? PAC:28918310
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0006 0.5kb upstream 0.5kb upstream 2487 true Scaffold2238: 15604-18090 Capsella grandiflora
Cagra.2238s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 17591-18090 Capsella grandiflora
Cagra.2238s0006 0.5kb downstream 0.5kb downstream 2487 true Scaffold2238: 15104-17590 Capsella grandiflora
Cagra.2238s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 15104-15603 Capsella grandiflora
Cagra.2238s0006 1.0kb upstream 1.0kb upstream 2987 true Scaffold2238: 15604-18590 Capsella grandiflora
Cagra.2238s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 17591-18590 Capsella grandiflora
Cagra.2238s0006 1.0kb downstream 1.0kb downstream 2987 true Scaffold2238: 14604-17590 Capsella grandiflora
Cagra.2238s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 14604-15603 Capsella grandiflora
Cagra.2238s0006 2.0kb upstream 2.0kb upstream 3987 true Scaffold2238: 15604-19590 Capsella grandiflora
Cagra.2238s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 17591-19590 Capsella grandiflora
Cagra.2238s0006 2.0kb downstream 2.0kb downstream 3987 true Scaffold2238: 13604-17590 Capsella grandiflora
Cagra.2238s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 13604-15603 Capsella grandiflora
Cagra.2238s0006 5.0kb upstream 5.0kb upstream 6987 true Scaffold2238: 15604-22590 Capsella grandiflora
Cagra.2238s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 17591-22590 Capsella grandiflora
Cagra.2238s0006 5.0kb downstream 5.0kb downstream 6987 true Scaffold2238: 10604-17590 Capsella grandiflora
Cagra.2238s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 10604-15603 Capsella grandiflora
Cagra.2238s0006 10.0kb upstream 10.0kb upstream 11987 true Scaffold2238: 15604-27590 Capsella grandiflora
Cagra.2238s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 17591-27590 Capsella grandiflora
Cagra.2238s0006 10.0kb downstream 10.0kb downstream 11987 true Scaffold2238: 5604-17590 Capsella grandiflora
Cagra.2238s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 5604-15603 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374534 5261 Brassicaceae View MSA
123837854 5264 Brassicales-Malvales View MSA
124338188 5266 SBM View MSA
124238908 5268 Malvidae View MSA
124068066 5270 Rosid View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain