Gene : Cagra.2197s0019 C. grandiflora v1.1
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  19
Name:  ? Cagra.2197s0019 Secondary Identifier:  ? PAC:28899658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0019 0.5kb upstream 0.5kb upstream 4826 true Scaffold2197: 54283-59108 Capsella grandiflora
Cagra.2197s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 58609-59108 Capsella grandiflora
Cagra.2197s0019 0.5kb downstream 0.5kb downstream 4826 true Scaffold2197: 53783-58608 Capsella grandiflora
Cagra.2197s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 53783-54282 Capsella grandiflora
Cagra.2197s0019 1.0kb upstream 1.0kb upstream 5326 true Scaffold2197: 54283-59608 Capsella grandiflora
Cagra.2197s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 58609-59608 Capsella grandiflora
Cagra.2197s0019 1.0kb downstream 1.0kb downstream 5326 true Scaffold2197: 53283-58608 Capsella grandiflora
Cagra.2197s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 53283-54282 Capsella grandiflora
Cagra.2197s0019 2.0kb upstream 2.0kb upstream 6326 true Scaffold2197: 54283-60608 Capsella grandiflora
Cagra.2197s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 58609-60608 Capsella grandiflora
Cagra.2197s0019 2.0kb downstream 2.0kb downstream 6326 true Scaffold2197: 52283-58608 Capsella grandiflora
Cagra.2197s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 52283-54282 Capsella grandiflora
Cagra.2197s0019 5.0kb upstream 5.0kb upstream 9326 true Scaffold2197: 54283-63608 Capsella grandiflora
Cagra.2197s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 58609-63608 Capsella grandiflora
Cagra.2197s0019 5.0kb downstream 5.0kb downstream 9326 true Scaffold2197: 49283-58608 Capsella grandiflora
Cagra.2197s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 49283-54282 Capsella grandiflora
Cagra.2197s0019 10.0kb upstream 10.0kb upstream 14326 true Scaffold2197: 54283-68608 Capsella grandiflora
Cagra.2197s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 58609-68608 Capsella grandiflora
Cagra.2197s0019 10.0kb downstream 10.0kb downstream 14326 true Scaffold2197: 44283-58608 Capsella grandiflora
Cagra.2197s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 44283-54282 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379992 5261 Brassicaceae View MSA
123829941 5264 Brassicales-Malvales View MSA
124338732 5266 SBM View MSA
124244193 5268 Malvidae View MSA
124062307 5270 Rosid View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain