Gene : Cagra.2197s0012 C. grandiflora v1.1
Defline:  (1 of 4) PTHR23336:SF7 - HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.2197s0012 Secondary Identifier:  ? PAC:28899678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0012 0.5kb upstream 0.5kb upstream 5909 true Scaffold2197: 36320-42228 Capsella grandiflora
Cagra.2197s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 41729-42228 Capsella grandiflora
Cagra.2197s0012 0.5kb downstream 0.5kb downstream 5909 true Scaffold2197: 35820-41728 Capsella grandiflora
Cagra.2197s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 35820-36319 Capsella grandiflora
Cagra.2197s0012 1.0kb upstream 1.0kb upstream 6409 true Scaffold2197: 36320-42728 Capsella grandiflora
Cagra.2197s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 41729-42728 Capsella grandiflora
Cagra.2197s0012 1.0kb downstream 1.0kb downstream 6409 true Scaffold2197: 35320-41728 Capsella grandiflora
Cagra.2197s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 35320-36319 Capsella grandiflora
Cagra.2197s0012 2.0kb upstream 2.0kb upstream 7409 true Scaffold2197: 36320-43728 Capsella grandiflora
Cagra.2197s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 41729-43728 Capsella grandiflora
Cagra.2197s0012 2.0kb downstream 2.0kb downstream 7409 true Scaffold2197: 34320-41728 Capsella grandiflora
Cagra.2197s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 34320-36319 Capsella grandiflora
Cagra.2197s0012 5.0kb upstream 5.0kb upstream 10409 true Scaffold2197: 36320-46728 Capsella grandiflora
Cagra.2197s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 41729-46728 Capsella grandiflora
Cagra.2197s0012 5.0kb downstream 5.0kb downstream 10409 true Scaffold2197: 31320-41728 Capsella grandiflora
Cagra.2197s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 31320-36319 Capsella grandiflora
Cagra.2197s0012 10.0kb upstream 10.0kb upstream 15409 true Scaffold2197: 36320-51728 Capsella grandiflora
Cagra.2197s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 41729-51728 Capsella grandiflora
Cagra.2197s0012 10.0kb downstream 10.0kb downstream 15409 true Scaffold2197: 26320-41728 Capsella grandiflora
Cagra.2197s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 26320-36319 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367580 5261 Brassicaceae View MSA
123836162 5264 Brassicales-Malvales View MSA
124345278 5266 SBM View MSA
124241699 5268 Malvidae View MSA
124062343 5270 Rosid View MSA
123751040 5271 Pentapetalae View MSA
122793164 5272 Eudicot View MSA
122045083 5273 Angiosperm View MSA
121345114 5274 Embryophyte View MSA
123380160 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain