Gene : Cagra.2197s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12309 - SEC61 GAMMA SUBUNIT Genomic Order:  18
Name:  ? Cagra.2197s0018 Secondary Identifier:  ? PAC:28899655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0018 0.5kb upstream 0.5kb upstream 1919 true Scaffold2197: 51904-53822 Capsella grandiflora
Cagra.2197s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 51904-52403 Capsella grandiflora
Cagra.2197s0018 0.5kb downstream 0.5kb downstream 1919 true Scaffold2197: 52404-54322 Capsella grandiflora
Cagra.2197s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 53823-54322 Capsella grandiflora
Cagra.2197s0018 1.0kb upstream 1.0kb upstream 2419 true Scaffold2197: 51404-53822 Capsella grandiflora
Cagra.2197s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 51404-52403 Capsella grandiflora
Cagra.2197s0018 1.0kb downstream 1.0kb downstream 2419 true Scaffold2197: 52404-54822 Capsella grandiflora
Cagra.2197s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 53823-54822 Capsella grandiflora
Cagra.2197s0018 2.0kb upstream 2.0kb upstream 3419 true Scaffold2197: 50404-53822 Capsella grandiflora
Cagra.2197s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 50404-52403 Capsella grandiflora
Cagra.2197s0018 2.0kb downstream 2.0kb downstream 3419 true Scaffold2197: 52404-55822 Capsella grandiflora
Cagra.2197s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 53823-55822 Capsella grandiflora
Cagra.2197s0018 5.0kb upstream 5.0kb upstream 6419 true Scaffold2197: 47404-53822 Capsella grandiflora
Cagra.2197s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 47404-52403 Capsella grandiflora
Cagra.2197s0018 5.0kb downstream 5.0kb downstream 6419 true Scaffold2197: 52404-58822 Capsella grandiflora
Cagra.2197s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 53823-58822 Capsella grandiflora
Cagra.2197s0018 10.0kb upstream 10.0kb upstream 11419 true Scaffold2197: 42404-53822 Capsella grandiflora
Cagra.2197s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 42404-52403 Capsella grandiflora
Cagra.2197s0018 10.0kb downstream 10.0kb downstream 11419 true Scaffold2197: 52404-63822 Capsella grandiflora
Cagra.2197s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 53823-63822 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381012 5261 Brassicaceae View MSA
123835670 5264 Brassicales-Malvales View MSA
124349266 5266 SBM View MSA
124250179 5268 Malvidae View MSA
124065252 5270 Rosid View MSA
123752578 5271 Pentapetalae View MSA
122795924 5272 Eudicot View MSA
122042910 5273 Angiosperm View MSA
121349505 5274 Embryophyte View MSA
123424142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain