Gene : Cagra.2197s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  24
Name:  ? Cagra.2197s0024 Secondary Identifier:  ? PAC:28899649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0024 0.5kb upstream 0.5kb upstream 5064 true Scaffold2197: 72616-77679 Capsella grandiflora
Cagra.2197s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 72616-73115 Capsella grandiflora
Cagra.2197s0024 0.5kb downstream 0.5kb downstream 5064 true Scaffold2197: 73116-78179 Capsella grandiflora
Cagra.2197s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 77680-78179 Capsella grandiflora
Cagra.2197s0024 1.0kb upstream 1.0kb upstream 5564 true Scaffold2197: 72116-77679 Capsella grandiflora
Cagra.2197s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 72116-73115 Capsella grandiflora
Cagra.2197s0024 1.0kb downstream 1.0kb downstream 5564 true Scaffold2197: 73116-78679 Capsella grandiflora
Cagra.2197s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 77680-78679 Capsella grandiflora
Cagra.2197s0024 2.0kb upstream 2.0kb upstream 6564 true Scaffold2197: 71116-77679 Capsella grandiflora
Cagra.2197s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 71116-73115 Capsella grandiflora
Cagra.2197s0024 2.0kb downstream 2.0kb downstream 6564 true Scaffold2197: 73116-79679 Capsella grandiflora
Cagra.2197s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 77680-79679 Capsella grandiflora
Cagra.2197s0024 5.0kb upstream 5.0kb upstream 9564 true Scaffold2197: 68116-77679 Capsella grandiflora
Cagra.2197s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 68116-73115 Capsella grandiflora
Cagra.2197s0024 5.0kb downstream 5.0kb downstream 9564 true Scaffold2197: 73116-82679 Capsella grandiflora
Cagra.2197s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 77680-82679 Capsella grandiflora
Cagra.2197s0024 10.0kb upstream 10.0kb upstream 14564 true Scaffold2197: 63116-77679 Capsella grandiflora
Cagra.2197s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 63116-73115 Capsella grandiflora
Cagra.2197s0024 10.0kb downstream 10.0kb downstream 14564 true Scaffold2197: 73116-87679 Capsella grandiflora
Cagra.2197s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 77680-87679 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361137 5261 Brassicaceae View MSA
123831643 5264 Brassicales-Malvales View MSA
124345778 5266 SBM View MSA
124237586 5268 Malvidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain