Gene : Cagra.2197s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  30
Name:  ? Cagra.2197s0030 Secondary Identifier:  ? PAC:28899648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0030 0.5kb upstream 0.5kb upstream 4599 true Scaffold2197: 93388-97986 Capsella grandiflora
Cagra.2197s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 97487-97986 Capsella grandiflora
Cagra.2197s0030 0.5kb downstream 0.5kb downstream 4599 true Scaffold2197: 92888-97486 Capsella grandiflora
Cagra.2197s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 92888-93387 Capsella grandiflora
Cagra.2197s0030 1.0kb upstream 1.0kb upstream 5099 true Scaffold2197: 93388-98486 Capsella grandiflora
Cagra.2197s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 97487-98486 Capsella grandiflora
Cagra.2197s0030 1.0kb downstream 1.0kb downstream 5099 true Scaffold2197: 92388-97486 Capsella grandiflora
Cagra.2197s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 92388-93387 Capsella grandiflora
Cagra.2197s0030 2.0kb upstream 2.0kb upstream 6099 true Scaffold2197: 93388-99486 Capsella grandiflora
Cagra.2197s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 97487-99486 Capsella grandiflora
Cagra.2197s0030 2.0kb downstream 2.0kb downstream 6099 true Scaffold2197: 91388-97486 Capsella grandiflora
Cagra.2197s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 91388-93387 Capsella grandiflora
Cagra.2197s0030 5.0kb upstream 5.0kb upstream 9099 true Scaffold2197: 93388-102486 Capsella grandiflora
Cagra.2197s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 97487-102486 Capsella grandiflora
Cagra.2197s0030 5.0kb downstream 5.0kb downstream 9099 true Scaffold2197: 88388-97486 Capsella grandiflora
Cagra.2197s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 88388-93387 Capsella grandiflora
Cagra.2197s0030 10.0kb upstream 10.0kb upstream 14099 true Scaffold2197: 93388-107486 Capsella grandiflora
Cagra.2197s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 97487-107486 Capsella grandiflora
Cagra.2197s0030 10.0kb downstream 10.0kb downstream 14099 true Scaffold2197: 83388-97486 Capsella grandiflora
Cagra.2197s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 83388-93387 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362812 5261 Brassicaceae View MSA
123827706 5264 Brassicales-Malvales View MSA
124342597 5266 SBM View MSA
124239042 5268 Malvidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain