Gene : Cagra.2230s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33914:SF2 - 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  2
Name:  ? Cagra.2230s0002 Secondary Identifier:  ? PAC:28906047
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2230s0002 0.5kb upstream 0.5kb upstream 2038 true Scaffold2230: 7199-9236 Capsella grandiflora
Cagra.2230s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2230: 7199-7698 Capsella grandiflora
Cagra.2230s0002 0.5kb downstream 0.5kb downstream 2038 true Scaffold2230: 7699-9736 Capsella grandiflora
Cagra.2230s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2230: 9237-9736 Capsella grandiflora
Cagra.2230s0002 1.0kb upstream 1.0kb upstream 2538 true Scaffold2230: 6699-9236 Capsella grandiflora
Cagra.2230s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2230: 6699-7698 Capsella grandiflora
Cagra.2230s0002 1.0kb downstream 1.0kb downstream 2538 true Scaffold2230: 7699-10236 Capsella grandiflora
Cagra.2230s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2230: 9237-10236 Capsella grandiflora
Cagra.2230s0002 2.0kb upstream 2.0kb upstream 3538 true Scaffold2230: 5699-9236 Capsella grandiflora
Cagra.2230s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2230: 5699-7698 Capsella grandiflora
Cagra.2230s0002 2.0kb downstream 2.0kb downstream 3538 true Scaffold2230: 7699-11236 Capsella grandiflora
Cagra.2230s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2230: 9237-11236 Capsella grandiflora
Cagra.2230s0002 5.0kb upstream 5.0kb upstream 6538 true Scaffold2230: 2699-9236 Capsella grandiflora
Cagra.2230s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2230: 2699-7698 Capsella grandiflora
Cagra.2230s0002 5.0kb downstream 5.0kb downstream 6538 true Scaffold2230: 7699-14236 Capsella grandiflora
Cagra.2230s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2230: 9237-14236 Capsella grandiflora
Cagra.2230s0002 10.0kb upstream 10.0kb upstream 9236 true Scaffold2230: 1-9236 Capsella grandiflora
Cagra.2230s0002 10.0kb upstream 10.0kb upstream 7698 false Scaffold2230: 1-7698 Capsella grandiflora
Cagra.2230s0002 10.0kb downstream 10.0kb downstream 11538 true Scaffold2230: 7699-19236 Capsella grandiflora
Cagra.2230s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold2230: 9237-19236 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372161 5261 Brassicaceae View MSA
123836320 5264 Brassicales-Malvales View MSA
124336784 5266 SBM View MSA
124253505 5268 Malvidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain