Gene : Cagra.2230s0007 C. grandiflora v1.1
Defline:  (1 of 1) KOG1781 - Small Nuclear ribonucleoprotein splicing factor Genomic Order:  7
Name:  ? Cagra.2230s0007 Secondary Identifier:  ? PAC:28906044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2230s0007 0.5kb upstream 0.5kb upstream 2151 true Scaffold2230: 18581-20731 Capsella grandiflora
Cagra.2230s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2230: 18581-19080 Capsella grandiflora
Cagra.2230s0007 0.5kb downstream 0.5kb downstream 2151 true Scaffold2230: 19081-21231 Capsella grandiflora
Cagra.2230s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2230: 20732-21231 Capsella grandiflora
Cagra.2230s0007 1.0kb upstream 1.0kb upstream 2651 true Scaffold2230: 18081-20731 Capsella grandiflora
Cagra.2230s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2230: 18081-19080 Capsella grandiflora
Cagra.2230s0007 1.0kb downstream 1.0kb downstream 2651 true Scaffold2230: 19081-21731 Capsella grandiflora
Cagra.2230s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2230: 20732-21731 Capsella grandiflora
Cagra.2230s0007 2.0kb upstream 2.0kb upstream 3651 true Scaffold2230: 17081-20731 Capsella grandiflora
Cagra.2230s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2230: 17081-19080 Capsella grandiflora
Cagra.2230s0007 2.0kb downstream 2.0kb downstream 3651 true Scaffold2230: 19081-22731 Capsella grandiflora
Cagra.2230s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2230: 20732-22731 Capsella grandiflora
Cagra.2230s0007 5.0kb upstream 5.0kb upstream 6651 true Scaffold2230: 14081-20731 Capsella grandiflora
Cagra.2230s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2230: 14081-19080 Capsella grandiflora
Cagra.2230s0007 5.0kb downstream 5.0kb downstream 5765 true Scaffold2230: 19081-24845 Capsella grandiflora
Cagra.2230s0007 5.0kb downstream 5.0kb downstream 4114 false Scaffold2230: 20732-24845 Capsella grandiflora
Cagra.2230s0007 10.0kb upstream 10.0kb upstream 11651 true Scaffold2230: 9081-20731 Capsella grandiflora
Cagra.2230s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2230: 9081-19080 Capsella grandiflora
Cagra.2230s0007 10.0kb downstream 10.0kb downstream 5765 true Scaffold2230: 19081-24845 Capsella grandiflora
Cagra.2230s0007 10.0kb downstream 10.0kb downstream 4114 false Scaffold2230: 20732-24845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370917 5261 Brassicaceae View MSA
123830302 5264 Brassicales-Malvales View MSA
124337538 5266 SBM View MSA
124241268 5268 Malvidae View MSA
124062559 5270 Rosid View MSA
123737808 5271 Pentapetalae View MSA
122791526 5272 Eudicot View MSA
122051368 5273 Angiosperm View MSA
121349484 5274 Embryophyte View MSA
123423999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain