Gene : Cagra.2231s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  11
Name:  ? Cagra.2231s0011 Secondary Identifier:  ? PAC:28900284
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRPSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0011 0.5kb upstream 0.5kb upstream 2754 true Scaffold2231: 57788-60541 Capsella grandiflora
Cagra.2231s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 60042-60541 Capsella grandiflora
Cagra.2231s0011 0.5kb downstream 0.5kb downstream 2754 true Scaffold2231: 57288-60041 Capsella grandiflora
Cagra.2231s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2231: 57288-57787 Capsella grandiflora
Cagra.2231s0011 1.0kb upstream 1.0kb upstream 3254 true Scaffold2231: 57788-61041 Capsella grandiflora
Cagra.2231s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 60042-61041 Capsella grandiflora
Cagra.2231s0011 1.0kb downstream 1.0kb downstream 3254 true Scaffold2231: 56788-60041 Capsella grandiflora
Cagra.2231s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2231: 56788-57787 Capsella grandiflora
Cagra.2231s0011 2.0kb upstream 2.0kb upstream 4254 true Scaffold2231: 57788-62041 Capsella grandiflora
Cagra.2231s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 60042-62041 Capsella grandiflora
Cagra.2231s0011 2.0kb downstream 2.0kb downstream 4254 true Scaffold2231: 55788-60041 Capsella grandiflora
Cagra.2231s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2231: 55788-57787 Capsella grandiflora
Cagra.2231s0011 5.0kb upstream 5.0kb upstream 7254 true Scaffold2231: 57788-65041 Capsella grandiflora
Cagra.2231s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2231: 60042-65041 Capsella grandiflora
Cagra.2231s0011 5.0kb downstream 5.0kb downstream 7254 true Scaffold2231: 52788-60041 Capsella grandiflora
Cagra.2231s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2231: 52788-57787 Capsella grandiflora
Cagra.2231s0011 10.0kb upstream 10.0kb upstream 12254 true Scaffold2231: 57788-70041 Capsella grandiflora
Cagra.2231s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2231: 60042-70041 Capsella grandiflora
Cagra.2231s0011 10.0kb downstream 10.0kb downstream 12254 true Scaffold2231: 47788-60041 Capsella grandiflora
Cagra.2231s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2231: 47788-57787 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378726 5261 Brassicaceae View MSA
123836907 5264 Brassicales-Malvales View MSA
124344711 5266 SBM View MSA
124237098 5268 Malvidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain