Gene : Cagra.2231s0009 C. grandiflora v1.1
Defline:  (1 of 4) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  9
Name:  ? Cagra.2231s0009 Secondary Identifier:  ? PAC:28900263
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1121 Capsella grandiflora pathologic  
Cgrandiflora PWY-361 Capsella grandiflora pathologic  
Cgrandiflora PWY-6039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0009 0.5kb upstream 0.5kb upstream 2242 true Scaffold2231: 39200-41441 Capsella grandiflora
Cagra.2231s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 39200-39699 Capsella grandiflora
Cagra.2231s0009 0.5kb downstream 0.5kb downstream 2242 true Scaffold2231: 39700-41941 Capsella grandiflora
Cagra.2231s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2231: 41442-41941 Capsella grandiflora
Cagra.2231s0009 1.0kb upstream 1.0kb upstream 2742 true Scaffold2231: 38700-41441 Capsella grandiflora
Cagra.2231s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 38700-39699 Capsella grandiflora
Cagra.2231s0009 1.0kb downstream 1.0kb downstream 2742 true Scaffold2231: 39700-42441 Capsella grandiflora
Cagra.2231s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2231: 41442-42441 Capsella grandiflora
Cagra.2231s0009 2.0kb upstream 2.0kb upstream 3742 true Scaffold2231: 37700-41441 Capsella grandiflora
Cagra.2231s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 37700-39699 Capsella grandiflora
Cagra.2231s0009 2.0kb downstream 2.0kb downstream 3742 true Scaffold2231: 39700-43441 Capsella grandiflora
Cagra.2231s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2231: 41442-43441 Capsella grandiflora
Cagra.2231s0009 5.0kb upstream 5.0kb upstream 6742 true Scaffold2231: 34700-41441 Capsella grandiflora
Cagra.2231s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2231: 34700-39699 Capsella grandiflora
Cagra.2231s0009 5.0kb downstream 5.0kb downstream 6742 true Scaffold2231: 39700-46441 Capsella grandiflora
Cagra.2231s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2231: 41442-46441 Capsella grandiflora
Cagra.2231s0009 10.0kb upstream 10.0kb upstream 11742 true Scaffold2231: 29700-41441 Capsella grandiflora
Cagra.2231s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2231: 29700-39699 Capsella grandiflora
Cagra.2231s0009 10.0kb downstream 10.0kb downstream 11742 true Scaffold2231: 39700-51441 Capsella grandiflora
Cagra.2231s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2231: 41442-51441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
122360483 5261 Brassicaceae View MSA
123838295 5264 Brassicales-Malvales View MSA
124322431 5266 SBM View MSA
124247989 5268 Malvidae View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain