Gene : Cagra.2231s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21141:SF37 - MRNA TURNOVER PROTEIN 4 HOMOLOG Genomic Order:  15
Name:  ? Cagra.2231s0015 Secondary Identifier:  ? PAC:28900265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2231s0015 0.5kb upstream 0.5kb upstream 2387 true Scaffold2231: 75707-78093 Capsella grandiflora
Cagra.2231s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2231: 77594-78093 Capsella grandiflora
Cagra.2231s0015 0.5kb downstream 0.5kb downstream 2387 true Scaffold2231: 75207-77593 Capsella grandiflora
Cagra.2231s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2231: 75207-75706 Capsella grandiflora
Cagra.2231s0015 1.0kb upstream 1.0kb upstream 2887 true Scaffold2231: 75707-78593 Capsella grandiflora
Cagra.2231s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2231: 77594-78593 Capsella grandiflora
Cagra.2231s0015 1.0kb downstream 1.0kb downstream 2887 true Scaffold2231: 74707-77593 Capsella grandiflora
Cagra.2231s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2231: 74707-75706 Capsella grandiflora
Cagra.2231s0015 2.0kb upstream 2.0kb upstream 3887 true Scaffold2231: 75707-79593 Capsella grandiflora
Cagra.2231s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2231: 77594-79593 Capsella grandiflora
Cagra.2231s0015 2.0kb downstream 2.0kb downstream 3887 true Scaffold2231: 73707-77593 Capsella grandiflora
Cagra.2231s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2231: 73707-75706 Capsella grandiflora
Cagra.2231s0015 5.0kb upstream 5.0kb upstream 6887 true Scaffold2231: 75707-82593 Capsella grandiflora
Cagra.2231s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold2231: 77594-82593 Capsella grandiflora
Cagra.2231s0015 5.0kb downstream 5.0kb downstream 6887 true Scaffold2231: 70707-77593 Capsella grandiflora
Cagra.2231s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2231: 70707-75706 Capsella grandiflora
Cagra.2231s0015 10.0kb upstream 10.0kb upstream 11887 true Scaffold2231: 75707-87593 Capsella grandiflora
Cagra.2231s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold2231: 77594-87593 Capsella grandiflora
Cagra.2231s0015 10.0kb downstream 10.0kb downstream 11887 true Scaffold2231: 65707-77593 Capsella grandiflora
Cagra.2231s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2231: 65707-75706 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375843 5261 Brassicaceae View MSA
123831009 5264 Brassicales-Malvales View MSA
124338233 5266 SBM View MSA
124240124 5268 Malvidae View MSA
124062070 5270 Rosid View MSA
123743293 5271 Pentapetalae View MSA
122790170 5272 Eudicot View MSA
122047939 5273 Angiosperm View MSA
121346262 5274 Embryophyte View MSA
123423929 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain