Gene : Cagra.2179s0041 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  41
Name:  ? Cagra.2179s0041 Secondary Identifier:  ? PAC:28918693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0041 0.5kb upstream 0.5kb upstream 3516 true Scaffold2179: 151171-154686 Capsella grandiflora
Cagra.2179s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 154187-154686 Capsella grandiflora
Cagra.2179s0041 0.5kb downstream 0.5kb downstream 3516 true Scaffold2179: 150671-154186 Capsella grandiflora
Cagra.2179s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 150671-151170 Capsella grandiflora
Cagra.2179s0041 1.0kb upstream 1.0kb upstream 4016 true Scaffold2179: 151171-155186 Capsella grandiflora
Cagra.2179s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 154187-155186 Capsella grandiflora
Cagra.2179s0041 1.0kb downstream 1.0kb downstream 4016 true Scaffold2179: 150171-154186 Capsella grandiflora
Cagra.2179s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 150171-151170 Capsella grandiflora
Cagra.2179s0041 2.0kb upstream 2.0kb upstream 5016 true Scaffold2179: 151171-156186 Capsella grandiflora
Cagra.2179s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 154187-156186 Capsella grandiflora
Cagra.2179s0041 2.0kb downstream 2.0kb downstream 5016 true Scaffold2179: 149171-154186 Capsella grandiflora
Cagra.2179s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 149171-151170 Capsella grandiflora
Cagra.2179s0041 5.0kb upstream 5.0kb upstream 8016 true Scaffold2179: 151171-159186 Capsella grandiflora
Cagra.2179s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 154187-159186 Capsella grandiflora
Cagra.2179s0041 5.0kb downstream 5.0kb downstream 8016 true Scaffold2179: 146171-154186 Capsella grandiflora
Cagra.2179s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 146171-151170 Capsella grandiflora
Cagra.2179s0041 10.0kb upstream 10.0kb upstream 13016 true Scaffold2179: 151171-164186 Capsella grandiflora
Cagra.2179s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 154187-164186 Capsella grandiflora
Cagra.2179s0041 10.0kb downstream 10.0kb downstream 13016 true Scaffold2179: 141171-154186 Capsella grandiflora
Cagra.2179s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 141171-151170 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365687 5261 Brassicaceae View MSA
123839144 5264 Brassicales-Malvales View MSA
124348232 5266 SBM View MSA
124250015 5268 Malvidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain