Gene : Cagra.2179s0057 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10688 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  57
Name:  ? Cagra.2179s0057 Secondary Identifier:  ? PAC:28918658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0057 0.5kb upstream 0.5kb upstream 4081 true Scaffold2179: 210844-214924 Capsella grandiflora
Cagra.2179s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 210844-211343 Capsella grandiflora
Cagra.2179s0057 0.5kb downstream 0.5kb downstream 4081 true Scaffold2179: 211344-215424 Capsella grandiflora
Cagra.2179s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 214925-215424 Capsella grandiflora
Cagra.2179s0057 1.0kb upstream 1.0kb upstream 4581 true Scaffold2179: 210344-214924 Capsella grandiflora
Cagra.2179s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 210344-211343 Capsella grandiflora
Cagra.2179s0057 1.0kb downstream 1.0kb downstream 4581 true Scaffold2179: 211344-215924 Capsella grandiflora
Cagra.2179s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 214925-215924 Capsella grandiflora
Cagra.2179s0057 2.0kb upstream 2.0kb upstream 5581 true Scaffold2179: 209344-214924 Capsella grandiflora
Cagra.2179s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 209344-211343 Capsella grandiflora
Cagra.2179s0057 2.0kb downstream 2.0kb downstream 5581 true Scaffold2179: 211344-216924 Capsella grandiflora
Cagra.2179s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 214925-216924 Capsella grandiflora
Cagra.2179s0057 5.0kb upstream 5.0kb upstream 8581 true Scaffold2179: 206344-214924 Capsella grandiflora
Cagra.2179s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 206344-211343 Capsella grandiflora
Cagra.2179s0057 5.0kb downstream 5.0kb downstream 8544 true Scaffold2179: 211344-219887 Capsella grandiflora
Cagra.2179s0057 5.0kb downstream 5.0kb downstream 4963 false Scaffold2179: 214925-219887 Capsella grandiflora
Cagra.2179s0057 10.0kb upstream 10.0kb upstream 13581 true Scaffold2179: 201344-214924 Capsella grandiflora
Cagra.2179s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 201344-211343 Capsella grandiflora
Cagra.2179s0057 10.0kb downstream 10.0kb downstream 8544 true Scaffold2179: 211344-219887 Capsella grandiflora
Cagra.2179s0057 10.0kb downstream 10.0kb downstream 4963 false Scaffold2179: 214925-219887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377761 5261 Brassicaceae View MSA
123801628 5264 Brassicales-Malvales View MSA
124298906 5266 SBM View MSA
124244415 5268 Malvidae View MSA
124067210 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain