Gene : Cagra.2181s0001 C. grandiflora v1.1
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1
Name:  ? Cagra.2181s0001 Secondary Identifier:  ? PAC:28907270
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2181s0001 0.5kb upstream 0.5kb upstream 1562 true Scaffold2181: 1-1562 Capsella grandiflora
Cagra.2181s0001 0.5kb upstream 0.5kb upstream 339 false Scaffold2181: 1-339 Capsella grandiflora
Cagra.2181s0001 0.5kb downstream 0.5kb downstream 1723 true Scaffold2181: 340-2062 Capsella grandiflora
Cagra.2181s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2181: 1563-2062 Capsella grandiflora
Cagra.2181s0001 1.0kb upstream 1.0kb upstream 1562 true Scaffold2181: 1-1562 Capsella grandiflora
Cagra.2181s0001 1.0kb upstream 1.0kb upstream 339 false Scaffold2181: 1-339 Capsella grandiflora
Cagra.2181s0001 1.0kb downstream 1.0kb downstream 2223 true Scaffold2181: 340-2562 Capsella grandiflora
Cagra.2181s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2181: 1563-2562 Capsella grandiflora
Cagra.2181s0001 2.0kb upstream 2.0kb upstream 1562 true Scaffold2181: 1-1562 Capsella grandiflora
Cagra.2181s0001 2.0kb upstream 2.0kb upstream 339 false Scaffold2181: 1-339 Capsella grandiflora
Cagra.2181s0001 2.0kb downstream 2.0kb downstream 3223 true Scaffold2181: 340-3562 Capsella grandiflora
Cagra.2181s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2181: 1563-3562 Capsella grandiflora
Cagra.2181s0001 5.0kb upstream 5.0kb upstream 1562 true Scaffold2181: 1-1562 Capsella grandiflora
Cagra.2181s0001 5.0kb upstream 5.0kb upstream 339 false Scaffold2181: 1-339 Capsella grandiflora
Cagra.2181s0001 5.0kb downstream 5.0kb downstream 6223 true Scaffold2181: 340-6562 Capsella grandiflora
Cagra.2181s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2181: 1563-6562 Capsella grandiflora
Cagra.2181s0001 10.0kb upstream 10.0kb upstream 1562 true Scaffold2181: 1-1562 Capsella grandiflora
Cagra.2181s0001 10.0kb upstream 10.0kb upstream 339 false Scaffold2181: 1-339 Capsella grandiflora
Cagra.2181s0001 10.0kb downstream 10.0kb downstream 11223 true Scaffold2181: 340-11562 Capsella grandiflora
Cagra.2181s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2181: 1563-11562 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333111 5261 Brassicaceae Singleton cluster - no MSA
123837862 5264 Brassicales-Malvales View MSA
124346409 5266 SBM View MSA
124241553 5268 Malvidae View MSA
124068895 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain