Gene : Cagra.2181s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Genomic Order:  9
Name:  ? Cagra.2181s0009 Secondary Identifier:  ? PAC:28907277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2181s0009 0.5kb upstream 0.5kb upstream 1978 true Scaffold2181: 26182-28159 Capsella grandiflora
Cagra.2181s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2181: 27660-28159 Capsella grandiflora
Cagra.2181s0009 0.5kb downstream 0.5kb downstream 1978 true Scaffold2181: 25682-27659 Capsella grandiflora
Cagra.2181s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2181: 25682-26181 Capsella grandiflora
Cagra.2181s0009 1.0kb upstream 1.0kb upstream 2478 true Scaffold2181: 26182-28659 Capsella grandiflora
Cagra.2181s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2181: 27660-28659 Capsella grandiflora
Cagra.2181s0009 1.0kb downstream 1.0kb downstream 2478 true Scaffold2181: 25182-27659 Capsella grandiflora
Cagra.2181s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2181: 25182-26181 Capsella grandiflora
Cagra.2181s0009 2.0kb upstream 2.0kb upstream 3478 true Scaffold2181: 26182-29659 Capsella grandiflora
Cagra.2181s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2181: 27660-29659 Capsella grandiflora
Cagra.2181s0009 2.0kb downstream 2.0kb downstream 3478 true Scaffold2181: 24182-27659 Capsella grandiflora
Cagra.2181s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2181: 24182-26181 Capsella grandiflora
Cagra.2181s0009 5.0kb upstream 5.0kb upstream 6478 true Scaffold2181: 26182-32659 Capsella grandiflora
Cagra.2181s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2181: 27660-32659 Capsella grandiflora
Cagra.2181s0009 5.0kb downstream 5.0kb downstream 6478 true Scaffold2181: 21182-27659 Capsella grandiflora
Cagra.2181s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2181: 21182-26181 Capsella grandiflora
Cagra.2181s0009 10.0kb upstream 10.0kb upstream 11478 true Scaffold2181: 26182-37659 Capsella grandiflora
Cagra.2181s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2181: 27660-37659 Capsella grandiflora
Cagra.2181s0009 10.0kb downstream 10.0kb downstream 11478 true Scaffold2181: 16182-27659 Capsella grandiflora
Cagra.2181s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2181: 16182-26181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122376757 5261 Brassicaceae View MSA
123828045 5264 Brassicales-Malvales View MSA
124341807 5266 SBM View MSA
124248049 5268 Malvidae View MSA
124069097 5270 Rosid View MSA
123746421 5271 Pentapetalae View MSA
122791090 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain